Gene Ava_1445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1445 
Symbol 
ID3682527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1786585 
End bp1787397 
Gene Length813 bp 
Protein Length270 aa 
Translation table11 
GC content43% 
IMG OID637716784 
Productmanganese and iron superoxide dismutase 
Protein accessionYP_321963 
Protein GI75907667 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.209664 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAT CTCTGTGGCA ACGGTTTATT GGCTTTTTCA TGGTAATTCT AGTGACATCT 
ATGCTTTATG CTTGCCAACC TCAAGAGGCA GCAAATTCCC TCCCAACTAA TGTAGCAAGT
CCTGTGCAAA CCACTGCGAC CGCAACAGAT AAACGTTCCA TAGGTTTTCT AGACCGCCCA
CTGGGGACAA ATCCAGCCGA GTTACCGCCA TTACCTTATG GTTATGATGC ACTAGAGAAA
GCGATCGATG CAGAAACTAT GAAACTGCAT CACGATAAAC ATCATGCCGC TTACGTTAAT
AACCTTAATA ATGCGTTGAA AAAGCATCCA GAACTGCAAA ATAGTAGTGT AGAAGCTTTA
CTGCGGGATT TGAATAGTGT GCCTGAAGAT ATTCGCAACA CAGTACGTAA TAATGGTGGC
GGACATCTCA ACCATACAAT TTTCTGGCAA ATTATGAGTC CCAATGGCGG TGGACAACCA
ACAGGAGACA TCGCCCAAGA AATCAACCAA ACCTTTGGCA ATTTTGAAGA GTTCAAAAAA
CAGTTTAACA AAGCAGGAGG CGATCGCTTT GGTAGTGGTT GGGTTTGGTT AGTGCGAAAT
CCCCAAGGAC AGTTACAGAT TGTCAGCACT CCTAATCAGG ATAGCCCTAT CGCAGAAGGT
TCATACCCAA TCATGGGGAA TGATGTCTGG GAACACGCCT ATTATCTCAG ATATCAAAAT
CGTCGTCCTG AATATTTAAA TAACTGGTGG AATGTAGTTA ATTGGTCAGA AATTAACAAA
CGCGCCCAAG CTTCACGGCA AAGTAATTCG TAA
 
Protein sequence
MKSSLWQRFI GFFMVILVTS MLYACQPQEA ANSLPTNVAS PVQTTATATD KRSIGFLDRP 
LGTNPAELPP LPYGYDALEK AIDAETMKLH HDKHHAAYVN NLNNALKKHP ELQNSSVEAL
LRDLNSVPED IRNTVRNNGG GHLNHTIFWQ IMSPNGGGQP TGDIAQEINQ TFGNFEEFKK
QFNKAGGDRF GSGWVWLVRN PQGQLQIVST PNQDSPIAEG SYPIMGNDVW EHAYYLRYQN
RRPEYLNNWW NVVNWSEINK RAQASRQSNS