Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1444 |
Symbol | |
ID | 3682585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1785926 |
End bp | 1786471 |
Gene Length | 546 bp |
Protein Length | 181 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637716783 |
Product | TPR repeat-containing protein |
Protein accession | YP_321962 |
Protein GI | 75907666 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.196528 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTGA CGCACCCTAC CAAAATGTCA ACGGTTCTCA GAGAAATTGC TTATTGTGAA CACCAAATAG GTGAGGTTGA TCGAGCATCA AACTATTACG AACAAGCTTT AAATCTTTGT CCCGCAGAAG ACGAACGAGA ATTAGGAGCA ATCTATGATT ATTTAGGGAT GCTGAAAGAC GACAAAGGGG AAGTGGATCA AGCAATAGCA CTCTACAATC AGTCTTTAGA AATAAAAGAA CGCATTGGAA ATGTCCAAGG CAAAGCGGCG ACTTTGCACC AACTGGGAAT TCTCCATGCC GATAAAGGGG AAGTCGCTCA AGCGATCGCA CTCTACCACC AGTCTTTGGA AATAACTGAA CACATTGGTA ATGTCCAAGG CAAAGCAATA ACTCTGTGGT GTTTGGGGCA TTTGGCGGAA CAGCAGGGTG AATACGCTAA GGCGATATCT TATTTGCAAC CAGCTTTAGA GATTTTGCAG CGATTACAGT CACCACACGC TGAAGATGTG AGGGTGAGTC TTGAGAGGGT GATGGGGAAT TCTTGA
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Protein sequence | MALTHPTKMS TVLREIAYCE HQIGEVDRAS NYYEQALNLC PAEDERELGA IYDYLGMLKD DKGEVDQAIA LYNQSLEIKE RIGNVQGKAA TLHQLGILHA DKGEVAQAIA LYHQSLEITE HIGNVQGKAI TLWCLGHLAE QQGEYAKAIS YLQPALEILQ RLQSPHAEDV RVSLERVMGN S
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