Gene Ava_1444 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1444 
Symbol 
ID3682585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1785926 
End bp1786471 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content45% 
IMG OID637716783 
ProductTPR repeat-containing protein 
Protein accessionYP_321962 
Protein GI75907666 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.196528 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTGA CGCACCCTAC CAAAATGTCA ACGGTTCTCA GAGAAATTGC TTATTGTGAA 
CACCAAATAG GTGAGGTTGA TCGAGCATCA AACTATTACG AACAAGCTTT AAATCTTTGT
CCCGCAGAAG ACGAACGAGA ATTAGGAGCA ATCTATGATT ATTTAGGGAT GCTGAAAGAC
GACAAAGGGG AAGTGGATCA AGCAATAGCA CTCTACAATC AGTCTTTAGA AATAAAAGAA
CGCATTGGAA ATGTCCAAGG CAAAGCGGCG ACTTTGCACC AACTGGGAAT TCTCCATGCC
GATAAAGGGG AAGTCGCTCA AGCGATCGCA CTCTACCACC AGTCTTTGGA AATAACTGAA
CACATTGGTA ATGTCCAAGG CAAAGCAATA ACTCTGTGGT GTTTGGGGCA TTTGGCGGAA
CAGCAGGGTG AATACGCTAA GGCGATATCT TATTTGCAAC CAGCTTTAGA GATTTTGCAG
CGATTACAGT CACCACACGC TGAAGATGTG AGGGTGAGTC TTGAGAGGGT GATGGGGAAT
TCTTGA
 
Protein sequence
MALTHPTKMS TVLREIAYCE HQIGEVDRAS NYYEQALNLC PAEDERELGA IYDYLGMLKD 
DKGEVDQAIA LYNQSLEIKE RIGNVQGKAA TLHQLGILHA DKGEVAQAIA LYHQSLEITE
HIGNVQGKAI TLWCLGHLAE QQGEYAKAIS YLQPALEILQ RLQSPHAEDV RVSLERVMGN
S