Gene Ava_1442 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1442 
Symbol 
ID3682583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1783906 
End bp1784499 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content37% 
IMG OID637716781 
Producthypothetical protein 
Protein accessionYP_321960 
Protein GI75907664 
COG category[S] Function unknown 
COG ID[COG4636] Uncharacterized protein conserved in cyanobacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.434824 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCG CAACCCAAAA ACGTTATTAC ACCCCCGAAG AATATCTAGA ACTGGAAGAA 
AAAGCCGAAT TTAGAAGCGA ATACCGCAAT GGAGAAATCA TTCCGATGAC AGGCGGCACT
ACTAATCATA ATAAAATAGC CCTTAATACA GCATTTGCTT TAAAATCTGC TTTGCGCGCT
CAAGATTACG AGATTTACAT GGCTGATGTG CGTTTATGGC TACCCCGTTA TCAGCAATAT
ACCTATCCTG ATGTCATGGT AATTCAAGGT GAGCCGGTTT ATGCCGGAAC TAATACCACC
ACTGTCACCA ATCCATCATT AATAGTAGAA GTTTTATCTA AGTCCACAAA AAATTATGAC
CAAGGCGATA AGTTTCATTA TTATCGCCCT ATTCCAGAAT TTCAAGAATA TATTTTAATC
GACCAGTATC AACATCATGT GATGAAATAT GTAAAAACTG CGGCTGATCA ATGGTTGTTT
ACTGAATTAG AAAGTGACTC TGCAACTTTA TCACTCAGCA CTGTTGATTT ACAAATTTCT
ATACCTGAAA TTTATGAAAA GGTGAGTTTT AGTGACAGCA ATGATGAAGA GTAA
 
Protein sequence
MQTATQKRYY TPEEYLELEE KAEFRSEYRN GEIIPMTGGT TNHNKIALNT AFALKSALRA 
QDYEIYMADV RLWLPRYQQY TYPDVMVIQG EPVYAGTNTT TVTNPSLIVE VLSKSTKNYD
QGDKFHYYRP IPEFQEYILI DQYQHHVMKY VKTAADQWLF TELESDSATL SLSTVDLQIS
IPEIYEKVSF SDSNDEE