Gene Ava_1441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1441 
Symbol 
ID3682582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1783089 
End bp1783529 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content42% 
IMG OID637716780 
Producttransposase IS4 
Protein accessionYP_321959 
Protein GI75907663 
COG category[L] Replication, recombination and repair 
COG ID[COG3293] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.640976 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTACGGTT TTGACGGATG TAAAAAGGTA AAGGGCAGAA AGCGGCAGAC TTTGGTTGAT 
AGTCTAGGAC TTTTGTTAAA AGTCGTTGTC AGTGAAGCAA ACGCCCCAGA ACGAGTACTT
GCTGCTTACG CACTCATGGA ATTGCTAGAA GAACGCCCGG AATTACTGGA AAAAGTTAAA
GTTATGTGGG TTGATTCTGG TTACGACGGT GATAAATTTG CACTCTGTGT TTGGTTGATG
ATCCAAGCTC ATGTTGAAGT CATACGGCGT ACTGAACAAG AATTTCAAGT TTTGCCTAAA
CGTTGGGTAG TAGAAAGAAC ATTTGGGTGG TTTAACCAAT ACCATCGTCT TAGTAAAGAT
TATGAGCGTC TTACCGAAAT GAGCGAAGCA GCCATATATG CTGTTATGAC TAGAATTATG
CTACGTCGTC TTGTCTCCTA A
 
Protein sequence
MYGFDGCKKV KGRKRQTLVD SLGLLLKVVV SEANAPERVL AAYALMELLE ERPELLEKVK 
VMWVDSGYDG DKFALCVWLM IQAHVEVIRR TEQEFQVLPK RWVVERTFGW FNQYHRLSKD
YERLTEMSEA AIYAVMTRIM LRRLVS