| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1436 |
|---|
| Symbol | |
|---|
| ID | 3682577 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1777382 |
|---|
| End bp | 1778164 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637716775 |
|---|
| Product | tRNA/rRNA methyltransferase (SpoU) |
|---|
| Protein accession | YP_321954 |
|---|
| Protein GI | 75907658 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0566] rRNA methylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.0303105 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTAACAA GTTTACAAAA CTCTTTAGTT AAACAAATCC GCAAGCTGCA CTCCACCAAG
GAGCGGCATA AACAAGGTCT GTTCCTGTTG GAAGGGACGC ATTTGTTAGA AGAAGCTTGT
GCAATGGATT ATCCCCTAGA GGTGGTGTGT TGTACTCCAG AATGGGAGGC AAGCCACACA
GCTTTGTGGG AAGAGGCTTG TAATCGATGC GATCGCTGTG AGATAGTCAG TGAAGAAGTA
TTGCAAGCGA TCGCTACTAC TGTACAACCA GATGGGGTAG TGGCAACAGC AAAGCGCAGC
GAACTCCAAA GCCAAATACC ATTTACAGGT GTAGTCCTAG CCTTAGAAAC CATCCAAGAC
CCTGGTAATT TAGGGACAAT CATTCGCACT GCGGCGGCTG CTGGTGCTTC CGGGTTATGG
TTGAGTCAAG ATAGTGTAGA TTTAGATAAC CCGAAAGTTC TCAGGGCTTC GGCTGGACAG
TGGTTTCGTT TAGCCACCGC AGTTAGTGAA GATTTAAAAG CAACAGTGCA GCTTTGCCAG
CAAGCAGGAA TGCAGGTAGT AGCCACCTTA CCCACAGCTA AGTTAACTTA TTGGGAAATA
GACTGGCATA AACCCAGTTT AATTTTATTG GGGAATGAAG GCGCTGGCTT GTCGCCTGAT
TTAGCGGCGA TGGCAGACCA GGAAGTGAAA ATTCCCCTGA GTCCTGGTGT AGAATCTTTG
AATGTGGCAA TTACATCCGC CTTAATGTTG TACGAAGTAC AGCGACAGTT AAACTTTCAA
TAG
|
|---|
| Protein sequence | MLTSLQNSLV KQIRKLHSTK ERHKQGLFLL EGTHLLEEAC AMDYPLEVVC CTPEWEASHT
ALWEEACNRC DRCEIVSEEV LQAIATTVQP DGVVATAKRS ELQSQIPFTG VVLALETIQD
PGNLGTIIRT AAAAGASGLW LSQDSVDLDN PKVLRASAGQ WFRLATAVSE DLKATVQLCQ
QAGMQVVATL PTAKLTYWEI DWHKPSLILL GNEGAGLSPD LAAMADQEVK IPLSPGVESL
NVAITSALML YEVQRQLNFQ
|
|---|
| |