Gene Ava_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1434 
Symbol 
ID3682574 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1774175 
End bp1775050 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content45% 
IMG OID637716772 
Productpeptidase M48, Ste24p 
Protein accessionYP_321952 
Protein GI75907656 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.214994 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTGT TCAAATCTCC GCTCATCGGT TTAAAAGCTG ACTCGTTTCG TCATCCACTA 
GACCTGGAAG CTACTACATC TCTCAAGCAA ATACCGGGCT TGGATATGTT GGTACGAAAT
TTACTAGGGC CAATGGCGGA GCAAGTTTTT TATGTAGAAA ATATTGCTTC GAGTGTTTTG
GTAGGGGAAA AACAACTGCC TAATTTACAC AAGCTGTTGT TAGAAGCTTG CAAAATTTTG
GATATTGAGC CTCCCCAGTT GTATGTCAGA CAACACCCGG CTCCTAATGC CTACACCTTT
GCTATGCGGG GTAAGCAACC TTTTGTAGTG TTGCATACTT CCTTAATTGA TATCCTGACT
CCAGAGGAAA TCCAGGCGGT GATTGCCCAT GAGTTGGGAC ATCTCAAGTG TGACCACAGT
GTTTATCTGA CACCTGTAAA TTTATTAGTA TTAGCAGCAT CAGCAGTCCC CAATATAGGG
GCTTTTATGG CTCAAGCTAT CCAGGCACAA CTTTTAGAGT GGGTACGTTG TGCTGAGTTT
ACCTGCGATC GCGCCGCATT ACTAGCTACC CAAGACCCCA AGGTCGTGAT GTCAGTTTTA
ATGAAGTTGG CTGGAGGTTC CCCCACCCTA GCACCGCAAC TGAATTTGGA TGCTTTTATT
GAGCAAGCTC GCGCTTACGA CGATATTAGT AAAAGCGAAA TGGGGGAAAT GGTTAAAGCT
GCTCGTACTG CTCAATTAAC CCACCCCGTT CCAGTCCTCC GTGCCAGAGA AATTGACAGA
TGGGCAAGTA GTCAAGAATA CCAATCTTTA TTACTAAATC ATGGTCAGAA ATATACCAGT
GAAGTAGCAC CAAAAGGTGG CTGGCGGAAT TGGTGA
 
Protein sequence
MSLFKSPLIG LKADSFRHPL DLEATTSLKQ IPGLDMLVRN LLGPMAEQVF YVENIASSVL 
VGEKQLPNLH KLLLEACKIL DIEPPQLYVR QHPAPNAYTF AMRGKQPFVV LHTSLIDILT
PEEIQAVIAH ELGHLKCDHS VYLTPVNLLV LAASAVPNIG AFMAQAIQAQ LLEWVRCAEF
TCDRAALLAT QDPKVVMSVL MKLAGGSPTL APQLNLDAFI EQARAYDDIS KSEMGEMVKA
ARTAQLTHPV PVLRAREIDR WASSQEYQSL LLNHGQKYTS EVAPKGGWRN W