| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1432 |
|---|
| Symbol | |
|---|
| ID | 3682572 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1771681 |
|---|
| End bp | 1772889 |
|---|
| Gene Length | 1209 bp |
|---|
| Protein Length | 402 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 32% |
|---|
| IMG OID | 637716770 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_321950 |
|---|
| Protein GI | 75907654 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4591] ABC-type transport system, involved in lipoprotein release, permease component |
|---|
| TIGRFAM ID | [TIGR01185] DevC protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.696316 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCAAC GTTATTTCCT TGAATTGCAA AAAATTCCCA TTGCTTGGCT ACAACTAAGC
TATCAACGCA ATCAAACTAT TGCGGGAATT ATTGGCATCC TTTGCATTAC ATTTTTACTA
TTTATTCAGA TAGGACTGAG AAACGCATTT TTAGAGGGGT CATTACAATT ACCTTTAAAC
TTCAATGCAG ATATTGTTTT AATTAGCTCT CTCTCTTCCA CTGCACTGCA ACCAGTAACT
TTTTCTTCAA GACCTTTATA TGAAGCACTA GCATTAAAGC AAGTTAACTC TGTTGCACCA
GTTTACATCA CATCAACCCA ATGGTACGAC AGAAACAACT CCCTTTATCG CATTAGAGTT
AACGTTCTAG GTATTCCTTT AAATATATCA ACACTTAATT TGCCGGGAGT AAAAGAAAAT
CTGCAAAAAC TCAAGAAGCA AAAATTTGCG TTATTTGACC ATAATGCCAG AAATGAATTT
TATCCTATCA TTGCCGAATT TCAAGCAAAA GGAGAATCTG CCGCAGAAAT CCAAGTAGGA
AATACTAGCT CGTTGAGAGG ACTTAGAGTT GTAGGATTGT TTGAATTAGG AGTTAATAAT
GCTTACGATG CTAGTTTTAT TATCAGTGCA ACAACTTTTA GTGAATTATT CGGACGTGAC
AATTCACAAA TAGATATTGG TTTAATTAAA TTAAAGCCAG AGTATAACTC AGATGTAGAT
ATAGAGAAAA CTGTTGATGA CTTAAGGAAT TATCTACCTA GAACCATTAA AGTATTCTCT
AAATCTGAAT TAATCAAACG AGAAAGAACC TTCCATGAAA ATAATTCTCC AATGGGTTTT
ATCTTTCGTT TTATTTTGAT TATTGCTGTC GTTGTCAGTA TTTTTATTTT ATATCAAATT
CTTTATGTAA AAGTTACACA AAACCTGGGG AATTATGCGA CGTTGAAGGC TTTAGGGTTT
AGTCAAAAAT CTTTGATTTC CGTAGTTATC CATGAGGGTA TTATTTTAGT AATTGCTGGA
TATATTCCAG GTATAATATT ATCTTATTTA GCTTATTCAT ATCTAATTAA TGTGACAAAG
ATTTTTATAG AAATGAATTT AAGAACAGCT TTGACTGTCT TATTGTTAGT GTATATGATT
TGCTTAATAT CATCAATTCT TTCTTTGATT AAGATTAAAG ACGCAGACCC AGTGGATGTT
TTTAAATAA
|
|---|
| Protein sequence | MIQRYFLELQ KIPIAWLQLS YQRNQTIAGI IGILCITFLL FIQIGLRNAF LEGSLQLPLN
FNADIVLISS LSSTALQPVT FSSRPLYEAL ALKQVNSVAP VYITSTQWYD RNNSLYRIRV
NVLGIPLNIS TLNLPGVKEN LQKLKKQKFA LFDHNARNEF YPIIAEFQAK GESAAEIQVG
NTSSLRGLRV VGLFELGVNN AYDASFIISA TTFSELFGRD NSQIDIGLIK LKPEYNSDVD
IEKTVDDLRN YLPRTIKVFS KSELIKRERT FHENNSPMGF IFRFILIIAV VVSIFILYQI
LYVKVTQNLG NYATLKALGF SQKSLISVVI HEGIILVIAG YIPGIILSYL AYSYLINVTK
IFIEMNLRTA LTVLLLVYMI CLISSILSLI KIKDADPVDV FK
|
|---|
| |