| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1427 |
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| Symbol | |
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| ID | 3682663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1761383 |
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| End bp | 1764151 |
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| Gene Length | 2769 bp |
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| Protein Length | 922 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637716764 |
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| Product | Alpha amylase, catalytic region |
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| Protein accession | YP_321945 |
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| Protein GI | 75907649 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3280] Maltooligosyl trehalose synthase |
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| TIGRFAM ID | [TIGR02401] malto-oligosyltrehalose synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.627603 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAATAC CAAAGGCAAC TTATAGAGTT CAGTTTACAC CGGAGTTTGG GTTTGATGAT
GCTAGAGCGA TCGCATCTTA CCTAGCAGAT TTAGGTATTT CTGATTTGTA CGCTTCTCCG
ATTTTTAAGG CTAGAACTGG TAGTACACAT GGTTATGATG TGGTGGATGG GTCACAACTC
AATCCCCAAC TAGGAACTAC TCAGGCTTTT GAGGCTTTGG TAGCTGAATT ACAGTCTCTA
GGTCTGGGTT GGTTGCAAGA TATTGTCCCA AACCACATGG CTTATAGTAG CGAAAATCCA
TATTTAATGG ATGTGCTGGA ACATGGCCCG GATTCTAGCT ATACAGACTA CTTTGATGTG
TGTTGGAACT CTCCATTTGC TAATAGTCAA GAGCGTATCC TTGCTCCTTT GCTAGGGGAT
TTTTATGGTG AATCTCTAGA AAAGGGAAAT ATTCAACTAC AATATGAGCA AAATGGTTTA
ACCGTTAACT ATTACAGTTT AAAATTGCCA TTGCGGTTAG AGTCTTACAC AAAATTTATT
ACTCATAATT TGGGTAAACT CACGCGTATG CTGGGACGTA ATCACCCTGA TTTTATTAAA
CTTTTAGGCA TTCTCTACAT TCTGAAAAGT GTTCCCTCGG AAGTTGCAGG AAAACAGCGA
CAAGACCAAA TTGCTTTTAT CAAGGGTTTG ATTTGGGAAC TCTACACCAG TAATGATGAT
ATTCACGCAT TCATTGAGGA AAATATTCAA ATATTTAACG GTGAACCAGG GAATTCTGAA
AGTTTTAATT TGTTAGATGA CTTACTCAAT GACCAATTCT ATCGCCTCGC TTTCTGGAAG
GTTGGGGCGG AAGAAATGAA CTATAGGCGG TTCTTTACTG TTAACGAATT GATTTCCGTG
AAAGTAGAAG AATTGCGCGT GTTTAACAAT ACACATAGTT TAATTCACCA ATTAGTAGAA
CAGGGCATAT TCACTGGATT AAGAATTGAC CATATTGACG GACTTTATCA ACCGACGCAG
TATTTAGAAC GTCTACGGGA AAAAATGGGG GATGTTTATG TCACGGTTGA GAAGATTTTA
GAATTAACTG AAGATTTACC AGAAAATTGG GATATTCAAG GTACGTCTGG ATATGATTTT
TTGAATTATG TAAATGGGGT ATTTTGTCAA TCTACAAATG AATCATTTTT TGATCATATC
TACCATAAAT TTATTGGTAA GCCTGTAGAT TATCCATCCC TTGTGAATGA GAAAAAACAC
CTGATTTTAG ACAAGAACTT AGCAGGTGAC ATAGATAATT TGGCGAATTT GTTAAAGAAT
ATTGCCAGTA AATACCGCTA TGGGAATGAT TTTACATTGA ATGGGTTGAA GCGAGCGATC
GCCGAAGTTC TGACCCTCTT TCCCATTTAC CGCACTTATA TCACTCCCGA TGGGATTGGA
GATAGCGATA AAGCCTGCAT CCTAGAAGTA ATGAAGACAG CTAAAAAACA AGTTCCTCTC
CTACATCACG AGATGAACTT TATAGAAAAA GTCATGCTGC TGGAATTCGA TGCTTCCCTT
ACCCAAACAG AACGGGAACA GTGGATATAT TTTGTCTTGC GGATGCAGCA ATACAGTGGG
CCTCTCATGG CTAAAGGTGT AGAAGATACT ACCTTATATG TCTACAACCG TCTGCTTTCC
TTGAATGAAG TAGGCGGAAA TCCCAGCCAT TTTGGTATTA ATGTCGATAA ATTCCATCAC
TTTAACCAAC AACACCAAGC TAACTGGCCT CACACCATGA ACGCCACAGC TACCCATGAC
ACAAAGCGCG GCGAAGACAT GAGAGCAAGG TTAAATGTGT TATCTGAAAT TCCCCAGGAG
TGGGAAGAAC AGGTAAATCA ATGGAGCCAA CTTAATCAGG TACATCGTAG CAATAACCAA
CCTGATCGCA ACGACGAATA TTTTCTCTAT CAAACTCTGG TAGGCGCGTT TCCTTTTGCA
GAACATGAAC AAGCGTCCTT TGTCCAGAGA GTGCAAGACT ACATGATTAA AGCCATTCGG
GAAGCGAAAG TACATACCGC ATGGTTACGC CCCGATAATG AGTATGAAGA AGCTTGTACC
TCCTTCATTC AGAAAATACT TGACCCAAAC TTATCACGGC AATTTTTAGA GACATTCCAA
CCCTTTCAAG AGAAAATCGC CGAATATGGG ATATTTAACT CCCTTTCCCA AACTCTCCTG
AAAATTGCTG CTCCTGGTGT ACCCGATTTT TACCAAGGAA CAGAACTTTG GGACTTAAGC
TTAGTTGACC CCGACAACCG TCGTCCTGTT GATTTTGAAC AACGGCGGGA TTATTTAACT
ACCATCCAAG AGCAAAGCAA AACCGATATT CTCGGCTTAA TTTCCGAACT ACTCCATCAA
AAAACCGACG GTAGAATCAA ACTATTTTTA ACACTCCAAG CCCTCAAAAC CAGAACACAA
TACCTAGAAT TATTCCAAGA CGGCGAATAT CTCCCGCTAG AAGTTCACGG AACCCACGCC
AACCATATCA TCGCATTTGC CAGACAAAAA GGTGAGCAAA CATTGATCGC CATCACCCCC
CGCTTCCTCA CCACCCTCAC CCCCCCAGGA AAACCCCCAC TAGGCGAAAT CTGGCAAGAT
ACTCACCTAA AACTCCCCCC CCAAATCTGG TACAACCCCC TCACCCACCA AACCCTACAA
ACCGAAGACA CCCTACCCAT CGCCCAAGCC CTCACCCACT TCCCCGTAGC CTTATTAATC
GCCCAATAA
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| Protein sequence | MRIPKATYRV QFTPEFGFDD ARAIASYLAD LGISDLYASP IFKARTGSTH GYDVVDGSQL
NPQLGTTQAF EALVAELQSL GLGWLQDIVP NHMAYSSENP YLMDVLEHGP DSSYTDYFDV
CWNSPFANSQ ERILAPLLGD FYGESLEKGN IQLQYEQNGL TVNYYSLKLP LRLESYTKFI
THNLGKLTRM LGRNHPDFIK LLGILYILKS VPSEVAGKQR QDQIAFIKGL IWELYTSNDD
IHAFIEENIQ IFNGEPGNSE SFNLLDDLLN DQFYRLAFWK VGAEEMNYRR FFTVNELISV
KVEELRVFNN THSLIHQLVE QGIFTGLRID HIDGLYQPTQ YLERLREKMG DVYVTVEKIL
ELTEDLPENW DIQGTSGYDF LNYVNGVFCQ STNESFFDHI YHKFIGKPVD YPSLVNEKKH
LILDKNLAGD IDNLANLLKN IASKYRYGND FTLNGLKRAI AEVLTLFPIY RTYITPDGIG
DSDKACILEV MKTAKKQVPL LHHEMNFIEK VMLLEFDASL TQTEREQWIY FVLRMQQYSG
PLMAKGVEDT TLYVYNRLLS LNEVGGNPSH FGINVDKFHH FNQQHQANWP HTMNATATHD
TKRGEDMRAR LNVLSEIPQE WEEQVNQWSQ LNQVHRSNNQ PDRNDEYFLY QTLVGAFPFA
EHEQASFVQR VQDYMIKAIR EAKVHTAWLR PDNEYEEACT SFIQKILDPN LSRQFLETFQ
PFQEKIAEYG IFNSLSQTLL KIAAPGVPDF YQGTELWDLS LVDPDNRRPV DFEQRRDYLT
TIQEQSKTDI LGLISELLHQ KTDGRIKLFL TLQALKTRTQ YLELFQDGEY LPLEVHGTHA
NHIIAFARQK GEQTLIAITP RFLTTLTPPG KPPLGEIWQD THLKLPPQIW YNPLTHQTLQ
TEDTLPIAQA LTHFPVALLI AQ
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