Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1425 |
Symbol | |
ID | 3682661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1757323 |
End bp | 1759824 |
Gene Length | 2502 bp |
Protein Length | 833 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637716762 |
Product | UvrD/REP helicase |
Protein accession | YP_321943 |
Protein GI | 75907647 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCAGAGA CTAATGTTAC TGCCACAGTA TCAGTATCCC AACCGTCATT TGTTGCGCTT TTGCAGGAGA GAATTGCTCT AATTCGCAGT ACTCTGCGCC CAGGACAACA ACAAATGGCT GACTGGCAGT CGGGGCCTTT GGCGGTATCG GCTGTACCTG GTGCTGGTAA ATCTACGGGG ATGGCGGCGG CGGCGGCGAT CGCTATTGCT CGTCAGTATC AGCAGGCGGC GGAGTCGCGC ACATCTTCCC GTCGTCAGTT GGTGGTAGTT ACTTTTACTC GTTCTGCGGC TGCCAATATT AAAGCAAAAA TCCGCAACTA CCTCAAGCAA TTATCCTTAC CGCAAACTGG TTTTGCTGTT TATACTCTGC ATGGTTTGGC GTTGAACATT GCCAGTCGCC ATCCTGATTT GTCGGGGTTA GAGTTAGAAA ATGTCACCCT CATCACCCCT AACCAAAGCC ATCGCTTTAT TCGTACCGCA GTCGAACAAT GGATTAATAA TCATCCCCGG CTTTATTTGC GGTTATTGGA AGGACAGCAA TTTGATGGTG AAGAGACAGA AAGGTTACGT CGCCAGTCAG TATTGCGGAC GGAAATTTTA CCTGATTTGG CAACTACCGT GATTCATGAA GCCAAAAGTT CTGGTATATC ACCAGAGCAA CTACGGCAAT GGAGTCAGGA AACTACAGAC GCTTACGAGA TTTTAACAAT TGCGGCGGGT TTATACGAAC AGTATCAAAA TCTGATGCGA TCGCGCGATT TCATCGACTA CGACGACATG ATTTTAGCAG CCCTACGCGT CTTGGAAAAC GACAGCGCCC GACGCATTGA GCAAAACCAA GTTTTCGCCG TCTTTGAAGA CGAAGCCCAA GATTCTAGCC CCTTGCAAAC GCAGTTATTA GAGATTTTGG CGAGTGGTGG AGAGGCAGGG GGCAGGGGGC AGGGGGCAGG GGGAGAACTG ACTGCAAGAT TTTCGCCCAA TCCTCAATCC CCAATCCCCA ATCCCCAGTC CCCAATCCCC AATCCCCAGT CCCCAATCCC CAATCCCCAG TCCCCAATCC CCAATCCCCA GTCCCCAATC CCCAGTCCCC AATCCCCAAT CAACTTAATT CGTGTCGGCG ACCCCAACCA AGCGATTAAC TCTACTTTTA CCCCGGCTGA CCCGATTTAC TTTCGGGAAT TTTGTCAAGA ATGCGATCGC TCTCGTAGAC TAGCAACAAT GGATCAAGCT GGTCGTAGTA CTGCCATGAT TATTGCAGCC GCTAATTTTG CGCTGGAATG GGTAAATAGT ACTTACATCG CCAAAAATCA AAAGTCTCCC CATCTTCCTT TGTCCACCCC CTTTAGTCTG CAAACAATAC GTCCTGTCCA CCAAACTGAT GTCAACCCAG CACCAGTAGG TAGGGGATTA GAATTACATA CACCCCGTGA TATTTATCAC ACTGTAGAAT TGCTATCTCA AAGGGTGATT GAGTTATTAA CTGAAGACAT GGGCAAGAGT GCGGCGGTGT TAGTGCGGGA GAATCGCCAA GGACGTTGGT TGGCGGAGGC GCTGGCACCT AAGTGTAAAG AGCATAATAT TACACTATTT GATGTGGGAG AAGGCGATCG CCGTTCTCAT GTTCCTCAAG AGATTTTAGC GTTATTGCAA TTTTGCGATC GCCCCCATTC TCCCGATTAC CTCAAAGCAG CTTTGGAAGC ATTGGTAAAG CGCCAATTAA TTCCGACTCA AGACCTCAAC GCCTTGGCTA GTCTACCAGA GGAATTTTTG TATCCTGGCC CCTTAGCTGC ACCCCAATCA GAAGTAGTCC AAAAAGCCTC TCATCTTTGT CGTAGTTTAC TGCGCGCTCG TTTGGAATTG CCTCTATATC AGATTATTTC CTTCCTCGCC TTGACCTTAA ATTATGACCA AGCGGAACTA GCAACTGCTG ATAAACTTTC GGAACGGGTA AACAAGCAAA TAGCTGGTAA CAACTCAATG GGGGCTATGC TTTCAGCCTT AAGTGAAATC GTCAATTCCG AACGTTTTGA ACCTGTGGAA ACCGATGATT CGGAAGCCCG TTACACCCGC AATGGTCAAT TAACGGTTAT CACCATGCAC AAAGCCAAAG GGCTGGACTG GAATTATGTT TTTATCCCCT TCCTCCATGA AAACTTAATC CCTGGTCGAT TTTGGGTTCC GCCCCAAAGC CAGTTTTTGG GTGACTTTAC TTTATCAGAA GTTGCCCGCG CCCAGATTCG GGCTGCGCTT CATGGTGAAA CTGGAATACC GGAAGTAACT TCAGCTTGGG AGCAAGCAAA ACACTTGAAA ACGGCGGAAG AATATCGTTT ACTATATGTG GCGATGACCA GGGCAAAGCA ACTACTGTGG ATGTCTGCGG CGCAAAAAGC CCCCTTTACT TGGAGTAAAC CAGAGAATTT ACAAGAACAA GCCCCTTGTC CAGTTTTTTC AGCTTTAAAG CGCCAGTTTC CTGAATTTGT AATTCACACT CAGCCTTCAT GA
|
Protein sequence | MSETNVTATV SVSQPSFVAL LQERIALIRS TLRPGQQQMA DWQSGPLAVS AVPGAGKSTG MAAAAAIAIA RQYQQAAESR TSSRRQLVVV TFTRSAAANI KAKIRNYLKQ LSLPQTGFAV YTLHGLALNI ASRHPDLSGL ELENVTLITP NQSHRFIRTA VEQWINNHPR LYLRLLEGQQ FDGEETERLR RQSVLRTEIL PDLATTVIHE AKSSGISPEQ LRQWSQETTD AYEILTIAAG LYEQYQNLMR SRDFIDYDDM ILAALRVLEN DSARRIEQNQ VFAVFEDEAQ DSSPLQTQLL EILASGGEAG GRGQGAGGEL TARFSPNPQS PIPNPQSPIP NPQSPIPNPQ SPIPNPQSPI PSPQSPINLI RVGDPNQAIN STFTPADPIY FREFCQECDR SRRLATMDQA GRSTAMIIAA ANFALEWVNS TYIAKNQKSP HLPLSTPFSL QTIRPVHQTD VNPAPVGRGL ELHTPRDIYH TVELLSQRVI ELLTEDMGKS AAVLVRENRQ GRWLAEALAP KCKEHNITLF DVGEGDRRSH VPQEILALLQ FCDRPHSPDY LKAALEALVK RQLIPTQDLN ALASLPEEFL YPGPLAAPQS EVVQKASHLC RSLLRARLEL PLYQIISFLA LTLNYDQAEL ATADKLSERV NKQIAGNNSM GAMLSALSEI VNSERFEPVE TDDSEARYTR NGQLTVITMH KAKGLDWNYV FIPFLHENLI PGRFWVPPQS QFLGDFTLSE VARAQIRAAL HGETGIPEVT SAWEQAKHLK TAEEYRLLYV AMTRAKQLLW MSAAQKAPFT WSKPENLQEQ APCPVFSALK RQFPEFVIHT QPS
|
| |