Gene Ava_1419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1419 
Symbol 
ID3682655 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1750849 
End bp1751628 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content49% 
IMG OID637716756 
Producthypothetical protein 
Protein accessionYP_321937 
Protein GI75907641 
COG category[S] Function unknown 
COG ID[COG1496] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00726] uncharacterized protein, YfiH family 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACACTT GGCACTGGCA CAATTGGGAA GGACTACCTT ACTTGAGTTG TATTCTCTTA 
AAAGATTGGC AGCACGGCTT TTTTACACAG CAATTTTGGC CGCGATCGCC CCACGAATTA
ACAAAGGTGC TGCACCCAGA AGCATCAGCA TATCGCTTGA AGCAGGTGCA TGGCAATACT
GTCCTTACCC CGCAAGAAGT TGACAATCAA ACTGATGGCA ATACGGACGA TTCTGCTTTA
GCCTCTGCCG ATGGTTTGTT GAGTCAGCAA CCCCTAGAAG CGATATGGGT AGCCAGTGCA
GATTGTACAC CAGTGTTGAT TGGAGATGTG AAAACTGGGC AGGTGGCCGC ACTCCATGCG
GGTTGGCGGG GTACAGCCCA GAAAATTGTC CCCCAAGCGA TCGCCCGGAT GCAAACACAC
GGCACTCAGT TAGCCGATTT ACGCATTGCA TTGGGACCAG CGATCGCCGG TGAGGTTTAC
CAAGTCTCTG TCAATGTCGC CGCCGAAATT GGGGCTAGTA TCATATCACA TGAAGACGCT
CACACAATCA TCAATTCATT ACACGAGCTA CCCCACTCAC CCTTACTAGC CGACCCAGAA
CCAGGAAGGG TGAGGGTTGA TGTCAGACGA GTCAATGCTT TACAGCTAGA AAACTTAGGT
ATTAGCCTAG AGCAAATAGC GATCGCTCCT TATTGTACAT ACCAAACACC GGAGCATTTC
TTCTCTTATC GCCGTGAAAA ACAGAAAAAA GTGCAGTGGT CAGGGATTGT TAGCCATTAG
 
Protein sequence
MHTWHWHNWE GLPYLSCILL KDWQHGFFTQ QFWPRSPHEL TKVLHPEASA YRLKQVHGNT 
VLTPQEVDNQ TDGNTDDSAL ASADGLLSQQ PLEAIWVASA DCTPVLIGDV KTGQVAALHA
GWRGTAQKIV PQAIARMQTH GTQLADLRIA LGPAIAGEVY QVSVNVAAEI GASIISHEDA
HTIINSLHEL PHSPLLADPE PGRVRVDVRR VNALQLENLG ISLEQIAIAP YCTYQTPEHF
FSYRREKQKK VQWSGIVSH