Gene Ava_1417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1417 
Symbol 
ID3682653 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1748297 
End bp1749868 
Gene Length1572 bp 
Protein Length523 aa 
Translation table11 
GC content50% 
IMG OID637716754 
Productpeptidase M23B 
Protein accessionYP_321935 
Protein GI75907639 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGC GCCATAACTC TGCCCATAAC CATTTGCACC AACCACAGCA ACAAGGTTTG 
ACCACAAAAC GTCTAGCTTA TACCCTACCA GCACAAAGTC TGTGTTTGTT GAGTAGCGTT
AGCCTTCTTA GTGGCGGATT AGCAGTCGCC CAAACGGAAA CATCCATAGA TAACATCGTT
CCTACTATTG AAAATGCCCA GCCCGCAGCA GGCACAATTA CTGTAAAAAA AGATATTGTT
ATACCGGAAG CATCACCAAC TCAGCCAAAA TTTTCCCAAC GACGAGCCTC ACTTAAACAA
AGACTGCGTA AGCAAGAAGT AGCCGAAACT AGACAGTCTC AACCCAAGCC TGAGTCTACT
GAACCCGTTT TTAGTGTGCG ACAGTCGCAA CCACAAGTAG AAACTTCCCG CGTTGCTCCC
ACTAAGAACC CAGAAGTTAA ACCCAAGGTA GCAGAAACTC CACGAGTTAC CCCTACCAAA
GACCCAGAAG TAGCAACTCC GACACCTTCC CTCAGAGATA ACCTTCCAGC CTTTGCCAAA
CCTGCCAACA ATGGTGTTGC GGCAGAGCAA ACCAGGGATT TTAACAACGC TTATATTGAC
CCAAACGATT ACAGTGATAA AACTGCGGGT ACTTATCAAG CGCCAAATTC TGTAATCATC
ACAGAACGCT CCAGTGGTTG TCGTACTGTG TTGTCTTCAG GACAAGGGAT TGGCAACGCC
TGCGCTAAAC CTGCGGATAA CCAGCCTGTA GCTAATTCCA GTGGCAAATC ATCCCCCTCT
TGGCTCAGAA GAAGTCAAAA TGCTCAGTTA GCTACTGTAC CCCCAGCCCG GCGACTCCTA
GCCACTAACA ACAATGCTAG ATGGGGCAAT TCTGGGGTCG CTGCTGCTGG CTCCACCAAA
GCCTCATATC ACCCCAATCG CTTTATTCCT AACCCCAGCA ATTTCGTCAG CACGACAACA
GTTAGCGCGA CTCCCATTGC TCCCAGTGGT GGTACACTAC CCCCACCAAT GGCAGAAGGT
AACGTTGCTC CTCGCGTCAG CACCGTAGCT TACGACATCC CCTTGGCATC GGTATTACCA
CAAATTCCTT ACGCCAATAC CATCGCCTAT CGCGGTACAG GCATGGTTTA TCCTTTAGCT
GTCGCTTCTC CCATCACTTC CCTGTTCGGC TGGCGTGTCC ACCCCATCAC AGGTAATCAG
CGCTTCCACG CCGGCACTGA TTTAGGTGCG CCTACAGGTA CACCGGTTTT GGCAGCCGCT
AGGGGTCAAG TAGCGACTTC TGATTGGGTG GGTGGTTATG GTTTAACGGT TATCCTCAAT
CATGGTTCTG CTCAACAAAC CCTCTATGGG CATATGTCAG AATTACTAGT CCAACCAGGA
CAATGGGTAG AACCAGGAAT GGTAATTGGA CGAGTCGGTA GCACCGGTAA CTCCACAGGT
CCTCACCTCC ACTTTGAAGT ACGCCACCTG ACACAAAACG GATGGGTGGC TGTTGACCCT
GGTGTACAAC TACAGATTGC CCTCAGCCAA TTGCTCAACA GTTCACGTAC AGCACGAGCT
ATTAGGGATT AG
 
Protein sequence
MTQRHNSAHN HLHQPQQQGL TTKRLAYTLP AQSLCLLSSV SLLSGGLAVA QTETSIDNIV 
PTIENAQPAA GTITVKKDIV IPEASPTQPK FSQRRASLKQ RLRKQEVAET RQSQPKPEST
EPVFSVRQSQ PQVETSRVAP TKNPEVKPKV AETPRVTPTK DPEVATPTPS LRDNLPAFAK
PANNGVAAEQ TRDFNNAYID PNDYSDKTAG TYQAPNSVII TERSSGCRTV LSSGQGIGNA
CAKPADNQPV ANSSGKSSPS WLRRSQNAQL ATVPPARRLL ATNNNARWGN SGVAAAGSTK
ASYHPNRFIP NPSNFVSTTT VSATPIAPSG GTLPPPMAEG NVAPRVSTVA YDIPLASVLP
QIPYANTIAY RGTGMVYPLA VASPITSLFG WRVHPITGNQ RFHAGTDLGA PTGTPVLAAA
RGQVATSDWV GGYGLTVILN HGSAQQTLYG HMSELLVQPG QWVEPGMVIG RVGSTGNSTG
PHLHFEVRHL TQNGWVAVDP GVQLQIALSQ LLNSSRTARA IRD