Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1417 |
Symbol | |
ID | 3682653 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1748297 |
End bp | 1749868 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637716754 |
Product | peptidase M23B |
Protein accession | YP_321935 |
Protein GI | 75907639 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCAGC GCCATAACTC TGCCCATAAC CATTTGCACC AACCACAGCA ACAAGGTTTG ACCACAAAAC GTCTAGCTTA TACCCTACCA GCACAAAGTC TGTGTTTGTT GAGTAGCGTT AGCCTTCTTA GTGGCGGATT AGCAGTCGCC CAAACGGAAA CATCCATAGA TAACATCGTT CCTACTATTG AAAATGCCCA GCCCGCAGCA GGCACAATTA CTGTAAAAAA AGATATTGTT ATACCGGAAG CATCACCAAC TCAGCCAAAA TTTTCCCAAC GACGAGCCTC ACTTAAACAA AGACTGCGTA AGCAAGAAGT AGCCGAAACT AGACAGTCTC AACCCAAGCC TGAGTCTACT GAACCCGTTT TTAGTGTGCG ACAGTCGCAA CCACAAGTAG AAACTTCCCG CGTTGCTCCC ACTAAGAACC CAGAAGTTAA ACCCAAGGTA GCAGAAACTC CACGAGTTAC CCCTACCAAA GACCCAGAAG TAGCAACTCC GACACCTTCC CTCAGAGATA ACCTTCCAGC CTTTGCCAAA CCTGCCAACA ATGGTGTTGC GGCAGAGCAA ACCAGGGATT TTAACAACGC TTATATTGAC CCAAACGATT ACAGTGATAA AACTGCGGGT ACTTATCAAG CGCCAAATTC TGTAATCATC ACAGAACGCT CCAGTGGTTG TCGTACTGTG TTGTCTTCAG GACAAGGGAT TGGCAACGCC TGCGCTAAAC CTGCGGATAA CCAGCCTGTA GCTAATTCCA GTGGCAAATC ATCCCCCTCT TGGCTCAGAA GAAGTCAAAA TGCTCAGTTA GCTACTGTAC CCCCAGCCCG GCGACTCCTA GCCACTAACA ACAATGCTAG ATGGGGCAAT TCTGGGGTCG CTGCTGCTGG CTCCACCAAA GCCTCATATC ACCCCAATCG CTTTATTCCT AACCCCAGCA ATTTCGTCAG CACGACAACA GTTAGCGCGA CTCCCATTGC TCCCAGTGGT GGTACACTAC CCCCACCAAT GGCAGAAGGT AACGTTGCTC CTCGCGTCAG CACCGTAGCT TACGACATCC CCTTGGCATC GGTATTACCA CAAATTCCTT ACGCCAATAC CATCGCCTAT CGCGGTACAG GCATGGTTTA TCCTTTAGCT GTCGCTTCTC CCATCACTTC CCTGTTCGGC TGGCGTGTCC ACCCCATCAC AGGTAATCAG CGCTTCCACG CCGGCACTGA TTTAGGTGCG CCTACAGGTA CACCGGTTTT GGCAGCCGCT AGGGGTCAAG TAGCGACTTC TGATTGGGTG GGTGGTTATG GTTTAACGGT TATCCTCAAT CATGGTTCTG CTCAACAAAC CCTCTATGGG CATATGTCAG AATTACTAGT CCAACCAGGA CAATGGGTAG AACCAGGAAT GGTAATTGGA CGAGTCGGTA GCACCGGTAA CTCCACAGGT CCTCACCTCC ACTTTGAAGT ACGCCACCTG ACACAAAACG GATGGGTGGC TGTTGACCCT GGTGTACAAC TACAGATTGC CCTCAGCCAA TTGCTCAACA GTTCACGTAC AGCACGAGCT ATTAGGGATT AG
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Protein sequence | MTQRHNSAHN HLHQPQQQGL TTKRLAYTLP AQSLCLLSSV SLLSGGLAVA QTETSIDNIV PTIENAQPAA GTITVKKDIV IPEASPTQPK FSQRRASLKQ RLRKQEVAET RQSQPKPEST EPVFSVRQSQ PQVETSRVAP TKNPEVKPKV AETPRVTPTK DPEVATPTPS LRDNLPAFAK PANNGVAAEQ TRDFNNAYID PNDYSDKTAG TYQAPNSVII TERSSGCRTV LSSGQGIGNA CAKPADNQPV ANSSGKSSPS WLRRSQNAQL ATVPPARRLL ATNNNARWGN SGVAAAGSTK ASYHPNRFIP NPSNFVSTTT VSATPIAPSG GTLPPPMAEG NVAPRVSTVA YDIPLASVLP QIPYANTIAY RGTGMVYPLA VASPITSLFG WRVHPITGNQ RFHAGTDLGA PTGTPVLAAA RGQVATSDWV GGYGLTVILN HGSAQQTLYG HMSELLVQPG QWVEPGMVIG RVGSTGNSTG PHLHFEVRHL TQNGWVAVDP GVQLQIALSQ LLNSSRTARA IRD
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