Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1409 |
Symbol | |
ID | 3682645 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1738985 |
End bp | 1739647 |
Gene Length | 663 bp |
Protein Length | 220 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637716746 |
Product | Beta-Ig-H3/fasciclin |
Protein accession | YP_321927 |
Protein GI | 75907631 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2335] Secreted and surface protein containing fasciclin-like repeats |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.92932 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCGGCAA CTAACAGCTT GCTAGGAAAA ACCTTTTTCA ATATTTTCGG TGTGATTAGT CTAACAGCGC TATCTGCCTG CGCTCAACCG ACTACAGAAA CCCCCACTGC CACAGTCCCC CCTGATGCGT CAACTCCCGT ATCAACGGTT CCTCCTCTCA CCCCAACTCC CAGCCCCACA ACACCAAATA ACACCACTGA GAATCGTAAC CTGGCAGAAC TCGCAAATTC GGCAGCAAAT CAAGGACAGT TTACAACATT AATACAGGCA GTAAAAGCCG CAGGTTTAAC TGATCAGTTA GCCGCCCCAG GACCATATAC CGTATTTGCC CCTACAGACG CTGCTTTCGC CGCTTTACCA AAAAACACCT TAAATAACCT TCTTCAACCA GCCAACAAAC AGCAATTAGT GAAACTTTTG GCCTATCACG TTCTTCCCGG CACTTTTACT TCAAAACAAC TCAAATCTGG ACAAGTCAAA ACAGTTGAAG GTAGCCCTGT TACCATCAAA GTTGACCCTA CCAGTAACAC AGTTACCGTC AACGGCGCTA GAGTCACTCA AGCAGATATA CCAGCTAGCA ACGGCATCGT TCATGTCGTA GACAAAGTTA TCTTACCCCC CAATGTTCCC AACAATGCCA ACACAACGCC GACACCACAA TAG
|
Protein sequence | MPATNSLLGK TFFNIFGVIS LTALSACAQP TTETPTATVP PDASTPVSTV PPLTPTPSPT TPNNTTENRN LAELANSAAN QGQFTTLIQA VKAAGLTDQL AAPGPYTVFA PTDAAFAALP KNTLNNLLQP ANKQQLVKLL AYHVLPGTFT SKQLKSGQVK TVEGSPVTIK VDPTSNTVTV NGARVTQADI PASNGIVHVV DKVILPPNVP NNANTTPTPQ
|
| |