| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1404 |
|---|
| Symbol | |
|---|
| ID | 3682698 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1732872 |
|---|
| End bp | 1733630 |
|---|
| Gene Length | 759 bp |
|---|
| Protein Length | 252 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 637716741 |
|---|
| Product | HEAT repeat-containing PBS lyase |
|---|
| Protein accession | YP_321922 |
|---|
| Protein GI | 75907626 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1413] FOG: HEAT repeat |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.284551 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGACG AAGAAGACCT AAGCCTACTC GATATCGAGG AGGAGTTAGA AAGCCCCTTA
GATAAGATAG AACCAATTAC GGCTGAGTCA GAAATACCAA AGCCTGACCC AGATGAAATG
CTAGCGCTTC TAGACAATCC GCAACCACAA AAACGGATGC TAGCGGCTCG TGCTTTTTGC
GATATCGAAG ACTCACGCGC TACGCCAATT TTGATTCGTC TTTTGAGTGA TAACTGTCCT
TTAGTACGAG TGAGCGCATC CTATGGCATT GGGCGAAATC CCAGCGCAGA TGCAGTTGAA
CCCTTAATTG CCCAACTGTA TCGGGATTGG AATGGCTATG TCAGGAAAGG TGTTGTTTGG
GCATTAGGTA ACTGCCGCGA TCGCCGTTGT TTAGCACCCT TAGCCGATGC TCTCAGAACG
GATATTTCCG CCGTGCGCCT TTGGTCTGCT AGCGCCTTAG CCCAAATGAC AGGAGTTAGC
TATGAGGCGA TCGTTGGCGC AATCCCACCA CTAATTGAAG CACTAGTTCA AGATACAGTA
GCCGCCGTGC GGAGTAACAG CGCGTGGTCA ATTGGGCAGT TGTGTAAAGA ACTGCCTTCT
AACATAGTTT ATGCCACAGC GATCGACGCT TTAATTCAGG CCTTCGCCGA AGACAAAGAC
TTAGGTGTAC GCGAAGATGC TAAAGCCTCA TTATTGGGTG TAGGCGACCC CCGTGGCTTG
CAACTCATTG AAACCCTAGA ACAAGAGGGT TGGTTTTAG
|
|---|
| Protein sequence | MYDEEDLSLL DIEEELESPL DKIEPITAES EIPKPDPDEM LALLDNPQPQ KRMLAARAFC
DIEDSRATPI LIRLLSDNCP LVRVSASYGI GRNPSADAVE PLIAQLYRDW NGYVRKGVVW
ALGNCRDRRC LAPLADALRT DISAVRLWSA SALAQMTGVS YEAIVGAIPP LIEALVQDTV
AAVRSNSAWS IGQLCKELPS NIVYATAIDA LIQAFAEDKD LGVREDAKAS LLGVGDPRGL
QLIETLEQEG WF
|
|---|
| |