Gene Ava_1397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1397 
Symbol 
ID3682691 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1725183 
End bp1726526 
Gene Length1344 bp 
Protein Length447 aa 
Translation table11 
GC content47% 
IMG OID637716734 
ProductBand 7 protein 
Protein accessionYP_321915 
Protein GI75907619 
COG category[S] Function unknown 
COG ID[COG2268] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.936063 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTAA TTAAACAAGA ATTAGCGACT GTAACAGTAG CGCAAGTTGA TCCGAATACA 
CCTGCTACTA ATAAAGAAAA TAATGGGATA GAAAGTCTAC TTTATGGTGG TCTTCCCATT
GCTCTATCTA TTTTTGGTGC ATTTTTACTG GTGTGGTTTA TCAAGTCTTT TTTGTGTATT
TGTAAACCCA ACGAAATCTT GATACTTTCG GGACGCAAAT GGCGGACTAA AGATGGGCAA
GAGATGGGTT ATCGAGTGTT ATTGGGTGGG CGCGCCATTC GGATTCCTAT AGTGGAAACA
GTAAAACGGA TGGATGTGAC AACTATGCCG GTACGGGTGG AAGTGCGGAA TGCTTACGCC
AAGGGGGGAA CGCCTTTGAA TATTCAAGCG ATCGCCAATG TGAAAATTTC CTCAGATCCG
GTGGTTGTAG GTAACGCCAT TGAACGCTTT TTAGACCGTG ATCGCTCAGA ATTGGCTCGT
GTTTCCCGCG AGACTCTAGA AGGCTATCTC CGGGGTGTCG TCGCCACCCT TACACCAGAA
GAACTCAACG AAGACCGCCT GAGTTTTGCC CAGCGTATCG CCTCTGATGT CAGCCGCGAC
CTTAGTAAAC TGGGATTGCA ACTGGACACC TTGAAAATTC AAAGCGTTTC TGACGATGTA
GACTATCTCA AATCTTGGGG ACGTAAACAA ATTGCCCTTG TAATTCGAGA CGCAGAGATT
GCCGAATCAA ACGCACTCAC CCAAGCCGAA CAAATCGAAG CCCAATCCGA AGAATACGCC
CAAGTCGCCA AAACCCAAGA CAAAATCATT GTGCTGGAGA AAGAAAACGA ACTCCGCACC
ATCAAAGCCC AGCTAGAACA AAGAGCCAAA TCAGAAGAAG AAATTACCAC GGCGGCTGCA
CAAGAAAAGA AAGCCAAAGC CGAACAAGTC TTACAAGTAC TGCGGGCTGA ACTAGAACGC
CTACGCCTAC AAGCCGATGA AGTCCTACCC GCCGAAGCCC GTCGCCAAGC CCAAGAACTC
CGCGCCAAAG GGGAAGCCGC CTTCCTAGAA GAAAATGCCA AAGCCGCAGC TTTAGTTAAC
GACATTCTTT CCCAAGTTTG GCAGCAAACT GGCAGCGATG CTTCTAAGTT ATTCCTCATT
CAACAAATTG AAACCGTCCT CCAAGAAGCA GTACAGATTC CTCAACGCAT TCACCTAGAG
AAGGTAAACG TGATTGATAA CGGCGATGGC AAATCCGTAG CCAGCTTGGT GAATATTTAC
CCCGAAATCG TCCTGCAATT CCTAGAAAAT GTCAATCGCA CCCTGGGTAT TGATGTTACT
GGAACCTTGG GGACTGGGGA TTAG
 
Protein sequence
MNLIKQELAT VTVAQVDPNT PATNKENNGI ESLLYGGLPI ALSIFGAFLL VWFIKSFLCI 
CKPNEILILS GRKWRTKDGQ EMGYRVLLGG RAIRIPIVET VKRMDVTTMP VRVEVRNAYA
KGGTPLNIQA IANVKISSDP VVVGNAIERF LDRDRSELAR VSRETLEGYL RGVVATLTPE
ELNEDRLSFA QRIASDVSRD LSKLGLQLDT LKIQSVSDDV DYLKSWGRKQ IALVIRDAEI
AESNALTQAE QIEAQSEEYA QVAKTQDKII VLEKENELRT IKAQLEQRAK SEEEITTAAA
QEKKAKAEQV LQVLRAELER LRLQADEVLP AEARRQAQEL RAKGEAAFLE ENAKAAALVN
DILSQVWQQT GSDASKLFLI QQIETVLQEA VQIPQRIHLE KVNVIDNGDG KSVASLVNIY
PEIVLQFLEN VNRTLGIDVT GTLGTGD