Gene Ava_1392 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1392 
Symbol 
ID3682686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1718757 
End bp1719998 
Gene Length1242 bp 
Protein Length413 aa 
Translation table11 
GC content35% 
IMG OID637716729 
Producthypothetical protein 
Protein accessionYP_321910 
Protein GI75907614 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.0748724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.453102 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGCCA GAATCCGCCG TCTTGTCAAT CAATTTTTTA GTAAGTCAAG AAAAATCAAC 
AATGAACCTC TGAATAGAGT GAGTTTGACT GTCATTATTT TGATTGATAT TTTTATCTTA
GTTAATGTTT TTACAGGTTT AGATGATATT AGTAGATGGC ATCTCAGCCC TTCGCAAGCT
TATCCATGTT ATTCCCAATG GCAGACTTAT CGCACAGAAA CTAATAAAGA TAAAGATTAT
GAAATTATTA GGCGATCGCT GCTAGGTAAT ATTAGTAATC TACCCAATCA AAAACAAACT
TATCAACAAA ATGAGATAGA CCATCTGGGT AAAGTATCTT CTACTTGCTT GCGGTATGGA
GAATACATCG ATAAAATCAA AACTCCTCAA AATCAGCAAG CTATCAAAGG AATTGACCAG
CGACAAGCAC AAATCAGCAA TCTTAAGCAA TCTAATAACC GGATTCGCGC CCAGTATGAC
TCTACACTAT TAGACAAACT TGCCGGACAA GCTCCTGGCC AATCGATTAA TCAAGTTCCA
GCAGAAAAAG CTAAACAGGA GTTAGATAAA AATAATCTGC AAATTTCTCA GTTAGAAAAG
GAAATATCTA ATCTTAAGAA TCAACTATTG ACTCAACCAG AAAGTAATAG TTTGATTGCT
TTCCTACAAA ATAGGGGAGA ATTTGCCACG GTTGAACAAG GTTATAAACA AGCATCTTTT
TGGTATCCAA GTATTCAACT TGCTTTTCAA TCTCTGTTTT TGTTACCACT GATATTTGCA
GCTTTATTAG TTCATCAATT TTCTCAGCGT CGGGGTTACG GACTCATTGC TCTGATTAGC
TGGCACTTAT TAGTGATCTT TTTCATCCCT TTAGTTCTGA AAATCTTTGA ATTTTTACAA
GTAGGGGCAA TATTTCAATT TGCCTTTGAT ATTATTAGTG CCGTTTTTGG TAGTTTACTG
TTCCTGGTCA GCTATGTTTA CATATTATTG ATTCCTTTGA TTGGTTTTGG GATTATCAAG
TTTTTCCAGA AAATTGTTCT CAATCCTAAA CTACAAGCAG TTAATAGAAT TCAAAAATCA
CGGTGTGTGA AGTGTGCGAA AAAAATTCGG GCTAATGATG CCTATTGCCC ACACTGTGGT
TATTATCAAT ACGTTGAATG TCAAAATTGT CACAACCTAA CCTACAAACA TTTACCACAC
TGTAAGCATT GCGGCACTTT ACAAGATATT GGTGATTTAT AG
 
Protein sequence
MFARIRRLVN QFFSKSRKIN NEPLNRVSLT VIILIDIFIL VNVFTGLDDI SRWHLSPSQA 
YPCYSQWQTY RTETNKDKDY EIIRRSLLGN ISNLPNQKQT YQQNEIDHLG KVSSTCLRYG
EYIDKIKTPQ NQQAIKGIDQ RQAQISNLKQ SNNRIRAQYD STLLDKLAGQ APGQSINQVP
AEKAKQELDK NNLQISQLEK EISNLKNQLL TQPESNSLIA FLQNRGEFAT VEQGYKQASF
WYPSIQLAFQ SLFLLPLIFA ALLVHQFSQR RGYGLIALIS WHLLVIFFIP LVLKIFEFLQ
VGAIFQFAFD IISAVFGSLL FLVSYVYILL IPLIGFGIIK FFQKIVLNPK LQAVNRIQKS
RCVKCAKKIR ANDAYCPHCG YYQYVECQNC HNLTYKHLPH CKHCGTLQDI GDL