Gene Ava_1389 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1389 
Symbol 
ID3682683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1713494 
End bp1713952 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content43% 
IMG OID637716726 
Producthypothetical protein 
Protein accessionYP_321907 
Protein GI75907611 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.236297 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCAAAATT TTCTCGCTTT AGCTGATCTC TCTGACCTGG ATATTGGAGG ATTTGTATTT 
GAGGGGTCTG CAATAAAAAA TACACTTACT TTAGGGGCTG GTGATACTTT CAACTTCGAC
TGGAACTTCC GCACTAACGA GACACTTAAC AAGGACTTCG CCTTTCTGTT GGTAGACGGT
ACACTGATTA AGTTGGCTGA CTTCACTGAT GCAACTCAAG CTGACAGTCC CTTTCTTCAA
AAAACAGGGA TTCGTTCTTA TACCTTTAGT ACTCCTGGAA CCTACACCTT CGCCTTGGGA
GTAGTGGATG TAGATGATTA TGGGACTACA TCGGCTTTGG AGATTAGTAA CATCAAGCTA
GAGAGAGTTC CAGTTCCTGA ACCAAGTACT ATCCTGGGTT TATTTACCGC CCTGGGTTGC
AGCGTAACTA TAAGGCGGTC AAGAAAAAAA TCTACTTAA
 
Protein sequence
MQNFLALADL SDLDIGGFVF EGSAIKNTLT LGAGDTFNFD WNFRTNETLN KDFAFLLVDG 
TLIKLADFTD ATQADSPFLQ KTGIRSYTFS TPGTYTFALG VVDVDDYGTT SALEISNIKL
ERVPVPEPST ILGLFTALGC SVTIRRSRKK ST