Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1383 |
Symbol | |
ID | 3682814 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1704454 |
End bp | 1705380 |
Gene Length | 927 bp |
Protein Length | 308 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637716721 |
Product | hemolytic protein HlpA-like |
Protein accession | YP_321902 |
Protein GI | 75907606 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0265582 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAACAC CAGTAACTTT TATTATTTTT AAACGCCCAC AAACAACAGA AAAAGTTTTC CAAGCGATTC GACAAGTCAA GCCGAAAAAA CTTTTTGTCA TTGCGGATGG CCCCCGGAAT GACCGCCCAG GTGAAGCTCA AAAGTGCGAA GCAACCAGAG CTATTATTGA CAAAGTAGAT TGGGAATGCG AAGTTATCAA GAATTATGCA GATACTAATT TAGGTTGTGC AAAGAGAGTT TCTAGCGGCT TAGATTGGGT ATTTAGTCAG GTAGAACAGA CAATCATTTT AGAAGATGAC TGCATCCCAC ATAATAGCTT TTTTCGATTT AGTGAAGAAT TACTAGAAAA ATATCAAAAT GATACGAGAA TTTCTAGTAT TTCTGCACAA AATGTCCAAG CTGGTAATAA ACTCACAGAT TATAGTTACT ATTTCTCTCG CTATAGCCAC TGTTGGGGTT GGGCAACTTG GAAACGTGCT TGGCAACATT ATGATTTAAA CATCAAACTC TGGCAAGAAG TGCAAGCACA AAATCTTTTA TATAACATTC TGCTCGACTC AAAAGCAGTC AATTATTGGC GTAGAACATT TCAAACTATT TACGAAAATC CTACAGGCAT CACTTGGGAT TATCAATGGA CTTTTGCTTG TTGGATGCAG GGGAGTTTAA GCATTACACC CAACGTTAAT TTAGTTGCTA ATGTGGGCGT GGGTGCAGAT GCAACTCATT TTACATCTAA TCAGGAATTT TCCTTCATCA ATCTACCGAC CCAACCAATG GAATTTCCCT TGAAGCATCC GCCATACATT ATTCGTAACG TAGAAGCGGA TACTTTTACA CAAAAAGTTG TTTATAAAGC AACAGCTTTA GATATTTTTA AAGAGGAATT AAAGAAAAAA CTTAATTATT CAAAATCCTA TAAATAA
|
Protein sequence | METPVTFIIF KRPQTTEKVF QAIRQVKPKK LFVIADGPRN DRPGEAQKCE ATRAIIDKVD WECEVIKNYA DTNLGCAKRV SSGLDWVFSQ VEQTIILEDD CIPHNSFFRF SEELLEKYQN DTRISSISAQ NVQAGNKLTD YSYYFSRYSH CWGWATWKRA WQHYDLNIKL WQEVQAQNLL YNILLDSKAV NYWRRTFQTI YENPTGITWD YQWTFACWMQ GSLSITPNVN LVANVGVGAD ATHFTSNQEF SFINLPTQPM EFPLKHPPYI IRNVEADTFT QKVVYKATAL DIFKEELKKK LNYSKSYK
|
| |