Gene Ava_1383 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1383 
Symbol 
ID3682814 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1704454 
End bp1705380 
Gene Length927 bp 
Protein Length308 aa 
Translation table11 
GC content37% 
IMG OID637716721 
Producthemolytic protein HlpA-like 
Protein accessionYP_321902 
Protein GI75907606 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0265582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAACAC CAGTAACTTT TATTATTTTT AAACGCCCAC AAACAACAGA AAAAGTTTTC 
CAAGCGATTC GACAAGTCAA GCCGAAAAAA CTTTTTGTCA TTGCGGATGG CCCCCGGAAT
GACCGCCCAG GTGAAGCTCA AAAGTGCGAA GCAACCAGAG CTATTATTGA CAAAGTAGAT
TGGGAATGCG AAGTTATCAA GAATTATGCA GATACTAATT TAGGTTGTGC AAAGAGAGTT
TCTAGCGGCT TAGATTGGGT ATTTAGTCAG GTAGAACAGA CAATCATTTT AGAAGATGAC
TGCATCCCAC ATAATAGCTT TTTTCGATTT AGTGAAGAAT TACTAGAAAA ATATCAAAAT
GATACGAGAA TTTCTAGTAT TTCTGCACAA AATGTCCAAG CTGGTAATAA ACTCACAGAT
TATAGTTACT ATTTCTCTCG CTATAGCCAC TGTTGGGGTT GGGCAACTTG GAAACGTGCT
TGGCAACATT ATGATTTAAA CATCAAACTC TGGCAAGAAG TGCAAGCACA AAATCTTTTA
TATAACATTC TGCTCGACTC AAAAGCAGTC AATTATTGGC GTAGAACATT TCAAACTATT
TACGAAAATC CTACAGGCAT CACTTGGGAT TATCAATGGA CTTTTGCTTG TTGGATGCAG
GGGAGTTTAA GCATTACACC CAACGTTAAT TTAGTTGCTA ATGTGGGCGT GGGTGCAGAT
GCAACTCATT TTACATCTAA TCAGGAATTT TCCTTCATCA ATCTACCGAC CCAACCAATG
GAATTTCCCT TGAAGCATCC GCCATACATT ATTCGTAACG TAGAAGCGGA TACTTTTACA
CAAAAAGTTG TTTATAAAGC AACAGCTTTA GATATTTTTA AAGAGGAATT AAAGAAAAAA
CTTAATTATT CAAAATCCTA TAAATAA
 
Protein sequence
METPVTFIIF KRPQTTEKVF QAIRQVKPKK LFVIADGPRN DRPGEAQKCE ATRAIIDKVD 
WECEVIKNYA DTNLGCAKRV SSGLDWVFSQ VEQTIILEDD CIPHNSFFRF SEELLEKYQN
DTRISSISAQ NVQAGNKLTD YSYYFSRYSH CWGWATWKRA WQHYDLNIKL WQEVQAQNLL
YNILLDSKAV NYWRRTFQTI YENPTGITWD YQWTFACWMQ GSLSITPNVN LVANVGVGAD
ATHFTSNQEF SFINLPTQPM EFPLKHPPYI IRNVEADTFT QKVVYKATAL DIFKEELKKK
LNYSKSYK