Gene Ava_1379 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1379 
Symbol 
ID3682810 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1700331 
End bp1701584 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content42% 
IMG OID637716717 
Productglycosyl transferase, group 1 
Protein accessionYP_321898 
Protein GI75907602 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.865158 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0304049 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGTTT TACTAATTAA TAAATCTGAT ATTGATGGTG GAGCAGCTCG TGCTGCCTAT 
AGATTGCATT GTGGACTACG GCATATTGGT GTCAACTCAC AGATGCTGGT GCAAGAGAAG
CTAACTAATG ACAAAACAGT GATTGCACCC GAAATTAGAT TATTTCAAGG AATTGCTAGA
GCAAAACTGA CATTTGATGC CTTGCCATTA AAGTTTTATC CTCAGCGTAG TCATAACCCA
TATTCAGTTC AGTGGTTGCC TGATACAGTA GCTTCTAAAG TGGCAAAAAT TGCTCCTGAT
ATTATCCATC TGCACTGGAT TCGGGGAGGA TTTATGCAAA TAGAAACAGT GGCAAAGCTG
AAACAACCTC TAGTTTGGAC TATTCATGAC ACGGGGGACT TTACTGGAGG ATGTCACGTT
ATTGGAGAAT GCGATCGCTA TCAAGTTTCC TGCGGAGCCT GTCCTCAACT TAATAGTAAT
TATGAACAAG ACATATCACG TTGGATATGG CAGCGTAAAG CCAAAGCTTG GAAAAACCTG
AAGATTACCT TGGTTTCACC CAGTCGTTGG TTAGCAGAGT GCGCTCGCTC TAGTCCTTTG
TTCCAAAATC TACCCATAGA AGTGATTCCT CACGGACTAG ATACGCAAAA ATACCGTCCC
ATCAGTCAAC ATTCTGCGCG GGAGATGCTC AATCTACCCC AAGATAAAAA ACTGGTACTG
TTCGGAGCAA TACAAGCAAC CAGTGACAGA AATAAAGGGT TTCATCTGTT GCAACCAGCT
TTACAACAAT TAAGCCAGTC AGCTTGGAGC GATAACTTAG AAATAGTCAT TTTTGGTGCA
TCCCAACCCG AAAAACCAAT TGATTTAGGC TTCAAAACCC ACTACTTAGG ACACTTGCAC
GACGATATAT CGTTAGCAGC CGTCTACTCA GCAGCAGATG TGATGTTAGT ACCATCTCTG
CAAGAGTCTT TTGGACAGAC AGCCTCTGAA TCACTCGCTT GTGGTACTCC CGTTGTGGCA
TTTAATGCCA CTGGCTTAAA AGATATTATT GACCATCAGC AAAACGGCTA TTTAGCTAAA
CCTTACGAAG CCGACGATTT TGCTCAAGGA ATTAATTGGG TACTGGAAAA TGAGCAGAGA
CTACAAAAAC TGTCATTTTA CGCCAGAGAA AAAGCTGAAA GAGAATTTAC TTTAGAACTT
CAAGCCCGTC GCTATTTAGC CCTTTTTCAG GCAATATTAC ATAACAAAAA TTAG
 
Protein sequence
MNVLLINKSD IDGGAARAAY RLHCGLRHIG VNSQMLVQEK LTNDKTVIAP EIRLFQGIAR 
AKLTFDALPL KFYPQRSHNP YSVQWLPDTV ASKVAKIAPD IIHLHWIRGG FMQIETVAKL
KQPLVWTIHD TGDFTGGCHV IGECDRYQVS CGACPQLNSN YEQDISRWIW QRKAKAWKNL
KITLVSPSRW LAECARSSPL FQNLPIEVIP HGLDTQKYRP ISQHSAREML NLPQDKKLVL
FGAIQATSDR NKGFHLLQPA LQQLSQSAWS DNLEIVIFGA SQPEKPIDLG FKTHYLGHLH
DDISLAAVYS AADVMLVPSL QESFGQTASE SLACGTPVVA FNATGLKDII DHQQNGYLAK
PYEADDFAQG INWVLENEQR LQKLSFYARE KAEREFTLEL QARRYLALFQ AILHNKN