Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1375 |
Symbol | |
ID | 3682806 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1696114 |
End bp | 1696887 |
Gene Length | 774 bp |
Protein Length | 257 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637716713 |
Product | glycosyl transferase WecB/TagA/CpsF |
Protein accession | YP_321894 |
Protein GI | 75907598 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1922] Teichoic acid biosynthesis proteins |
TIGRFAM ID | [TIGR00696] bacterial polymer biosynthesis proteins, WecB/TagA/CpsF family |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.104063 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATC GGCCTTCTTA TAAACTTCTT GGGGTTCGAG TAGATGCTCT TTCTATCCCT GAATTAAATT GTTTAATTGA GGAGTCTATT GAGCAGGGTA AAAAATGGAT TATTGCTAAT CACAACCTGC ATAGCCTTTA TCTATTCCAC AAAGACTTAG AAATGCAAGC CTTTTATGCT AAGGCAGAAT ACATCCATAT TGATAGTATG CCTATAGTTT TCATTGGCAA GCTGCTAGGT TTTCCGATGA AGAGAGAACA GAGAGTAACC TATGCGGACT GGATATGGCC TCTCATGGAA GAAGCAGCCA GTAAGGGTTG GCGGATATTT TATCTAGGTT CTAAACCAGG AGTTGCTGAA CAAGGAGCCA GTGTTTTGCG CCAAAAGTTT CCTGGGTTAC AAATTGCTTG CTCTCACGGC TATTTTGATA CTAGTGAAGA GAGTGAAGAA AATCTCACTG TTATTAAAGC CATCAATGAT TACAAACCCC ATGTATTAAT GGTGGGGATG GGGATGCCAC GACAAGAGCA TTGGATTGCC CAAAATTTGG AACGTATTCA ACCCAATGCT ATTTTGACCA GTGGAGCTTG CCTAGACTAT GTGGCAGGAG CAATACCTAC GCCACCTCGT TGGATGGGAA GAATGGGGCT GGAATGGTTG TATAGGTTGT TGACTGAACC AACTAGATTG TGGAGACGTT ATTTACTTGA GCCGTGGTTT TTAGGCACTC TTTTCTTACG AGAAATTTGG AGTCTATCTA GTCAATCAAA ATAG
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Protein sequence | MKNRPSYKLL GVRVDALSIP ELNCLIEESI EQGKKWIIAN HNLHSLYLFH KDLEMQAFYA KAEYIHIDSM PIVFIGKLLG FPMKREQRVT YADWIWPLME EAASKGWRIF YLGSKPGVAE QGASVLRQKF PGLQIACSHG YFDTSEESEE NLTVIKAIND YKPHVLMVGM GMPRQEHWIA QNLERIQPNA ILTSGACLDY VAGAIPTPPR WMGRMGLEWL YRLLTEPTRL WRRYLLEPWF LGTLFLREIW SLSSQSK
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