Gene Ava_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1370 
Symbol 
ID3682801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1689210 
End bp1689707 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content42% 
IMG OID637716708 
Producthypothetical protein 
Protein accessionYP_321889 
Protein GI75907593 
COG category[S] Function unknown 
COG ID[COG3431] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0112209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTACAAAC CTGTAGAAGA TAGCCCAATT TCCGTGTACG AAATCAATCG GGGTCGCATT 
GTCCGCACCT TGGAATTGAT TCAAGATGTG ATTGTGATTT CCTTATGTAT CGGTTTATTT
AGCTTCATGG CTATTCAGGT ATGGGATATG TTCCTTTCCC TGCTTCCACC TTTAGATTTC
CATGTTGTCA CTGCCGATAT TTTGTTTCTG CTGATTTTAG TCGAATTATT CCGACTGCTG
ATTATCTACC TCCAAGAACA ACGCATATCT ATAGGCGTGG CGGTAGAGGT TTCCATTGTC
TCTGCTTTGC GAGAAGTCAT TGTTAAAGGT GTATTAGAAA CTAATTGGAG TCAAGTTTTA
GCAACTTGTG CCTTCTTATT AGTTTTGGGA ATATTGCTGG TTTTGCGAGT TTGGCTACCG
CCCACTTTTG AAGGGATTGA CCCAGAACAA CGAATAGCCA AGCGCTATCA AAAAATGCAG
GCAAACGGAC GAGATTAG
 
Protein sequence
MYKPVEDSPI SVYEINRGRI VRTLELIQDV IVISLCIGLF SFMAIQVWDM FLSLLPPLDF 
HVVTADILFL LILVELFRLL IIYLQEQRIS IGVAVEVSIV SALREVIVKG VLETNWSQVL
ATCAFLLVLG ILLVLRVWLP PTFEGIDPEQ RIAKRYQKMQ ANGRD