Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1366 |
Symbol | |
ID | 3682875 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1682536 |
End bp | 1683531 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637716704 |
Product | glycosyl transferase family protein |
Protein accession | YP_321885 |
Protein GI | 75907589 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 0.959052 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0372616 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGTAATT TGCCTTTGAT TAGTGTAGTC ATACCAACCT ACGGGCGAGA GGAAATCCTC AGAGATAGCA TTGTCGATGT CTTAAATCAG GATTATCCCA ATTATGAAGT TTTGGTAGTA GACCAGTCGC CAAAACACAA GCCAGAAATT GAAACTTACT TAGAAGAGGT AGCCGCAGCA GGTAAAGTTA AGTGGTTTCG CTTAGATTGG GCTAGTTTAC CAGGCGCACG TAATTATGCG ATACGGCGAG CCTCTGGAGA GATAGTTTTA TTTATTGATG ATGATGTCAA ATTAAAGCCC GGATTTTTAG CAGCCCATGC AAAAAACTAC ATACAAAATC CCGATGTAGG AGCTGTAGCA GGTAGGGTAT TTGACAGAAT GAAATTAGGT GATTCTGGGG GAAATTTGGA GATTGAATAT CTCCCACCTG AAGCGATGGA CCCAGGAGTA GCTTGGTATC ATATCGACTT GGTGCATACG GTCAAACCCC AGCAAGTATT AACCGCTAGG GGTTGTAATA TGTCTTTTCG TCGAGAGATT TTTACTAAGT ATGGACTCAG GTTTGATGAA AGATTTCGCG GTAGTGCAGT CCGTGAAGAG TCAGATTTTT GTTTAAGGTT GCGGCAGACA GGGTATAAAA TTTGGTATGA CCCAGAGGCA GATTTAATCC ACTTAGGTGA AGAAACGGGG GGTTGTCATG ATATTAGTAT GCGATCGCTC CAATATCAAT TCACTTTCTA CCACAATCAT TTCCTCTTAG GGTTGAAAAA TCTCAATTTT AGCCAAGCTT TACGCCTATA CGCCCGTTTA TTTGATTGTC ACGTCCTTGG TCGTCCCCCT TGTCACAAAA GCGGTTCTCC CGTCAAAATC GTTACCCGTG GCATATTCTA TATCTTAGGT TTTTTCAGAG CGTTAGGAAG TGTCATCCAG TCAAGTTGGA ATGATGGTCA AATTTACAGC CATCTGGATA AACAATCAGT AGTCAATGAT CATTAG
|
Protein sequence | MSNLPLISVV IPTYGREEIL RDSIVDVLNQ DYPNYEVLVV DQSPKHKPEI ETYLEEVAAA GKVKWFRLDW ASLPGARNYA IRRASGEIVL FIDDDVKLKP GFLAAHAKNY IQNPDVGAVA GRVFDRMKLG DSGGNLEIEY LPPEAMDPGV AWYHIDLVHT VKPQQVLTAR GCNMSFRREI FTKYGLRFDE RFRGSAVREE SDFCLRLRQT GYKIWYDPEA DLIHLGEETG GCHDISMRSL QYQFTFYHNH FLLGLKNLNF SQALRLYARL FDCHVLGRPP CHKSGSPVKI VTRGIFYILG FFRALGSVIQ SSWNDGQIYS HLDKQSVVND H
|
| |