Gene Ava_1366 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1366 
Symbol 
ID3682875 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1682536 
End bp1683531 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content42% 
IMG OID637716704 
Productglycosyl transferase family protein 
Protein accessionYP_321885 
Protein GI75907589 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value0.959052 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0372616 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATT TGCCTTTGAT TAGTGTAGTC ATACCAACCT ACGGGCGAGA GGAAATCCTC 
AGAGATAGCA TTGTCGATGT CTTAAATCAG GATTATCCCA ATTATGAAGT TTTGGTAGTA
GACCAGTCGC CAAAACACAA GCCAGAAATT GAAACTTACT TAGAAGAGGT AGCCGCAGCA
GGTAAAGTTA AGTGGTTTCG CTTAGATTGG GCTAGTTTAC CAGGCGCACG TAATTATGCG
ATACGGCGAG CCTCTGGAGA GATAGTTTTA TTTATTGATG ATGATGTCAA ATTAAAGCCC
GGATTTTTAG CAGCCCATGC AAAAAACTAC ATACAAAATC CCGATGTAGG AGCTGTAGCA
GGTAGGGTAT TTGACAGAAT GAAATTAGGT GATTCTGGGG GAAATTTGGA GATTGAATAT
CTCCCACCTG AAGCGATGGA CCCAGGAGTA GCTTGGTATC ATATCGACTT GGTGCATACG
GTCAAACCCC AGCAAGTATT AACCGCTAGG GGTTGTAATA TGTCTTTTCG TCGAGAGATT
TTTACTAAGT ATGGACTCAG GTTTGATGAA AGATTTCGCG GTAGTGCAGT CCGTGAAGAG
TCAGATTTTT GTTTAAGGTT GCGGCAGACA GGGTATAAAA TTTGGTATGA CCCAGAGGCA
GATTTAATCC ACTTAGGTGA AGAAACGGGG GGTTGTCATG ATATTAGTAT GCGATCGCTC
CAATATCAAT TCACTTTCTA CCACAATCAT TTCCTCTTAG GGTTGAAAAA TCTCAATTTT
AGCCAAGCTT TACGCCTATA CGCCCGTTTA TTTGATTGTC ACGTCCTTGG TCGTCCCCCT
TGTCACAAAA GCGGTTCTCC CGTCAAAATC GTTACCCGTG GCATATTCTA TATCTTAGGT
TTTTTCAGAG CGTTAGGAAG TGTCATCCAG TCAAGTTGGA ATGATGGTCA AATTTACAGC
CATCTGGATA AACAATCAGT AGTCAATGAT CATTAG
 
Protein sequence
MSNLPLISVV IPTYGREEIL RDSIVDVLNQ DYPNYEVLVV DQSPKHKPEI ETYLEEVAAA 
GKVKWFRLDW ASLPGARNYA IRRASGEIVL FIDDDVKLKP GFLAAHAKNY IQNPDVGAVA
GRVFDRMKLG DSGGNLEIEY LPPEAMDPGV AWYHIDLVHT VKPQQVLTAR GCNMSFRREI
FTKYGLRFDE RFRGSAVREE SDFCLRLRQT GYKIWYDPEA DLIHLGEETG GCHDISMRSL
QYQFTFYHNH FLLGLKNLNF SQALRLYARL FDCHVLGRPP CHKSGSPVKI VTRGIFYILG
FFRALGSVIQ SSWNDGQIYS HLDKQSVVND H