Gene Ava_1362 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1362 
Symbol 
ID3682871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1679117 
End bp1680289 
Gene Length1173 bp 
Protein Length390 aa 
Translation table11 
GC content40% 
IMG OID637716700 
Productglycosyl transferase, group 1 
Protein accessionYP_321881 
Protein GI75907585 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0392501 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0175449 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TACAAATTGT CCCATCTATT TCTTTGATTT ATGGCGGACC TAGTCAAATG 
GTATTGGGAC TATCACCAGC GTTAGTAAAA GCAGGTGCGA CAGTTACAAT CATTACAACT
GATAGCAATG GTGATAGTGG TCAAAAACCT TTAGATGTGC CTTTAAATGT TCCCATTAAA
CAAGATGGTT ATGAAATAAT ATATTTTCGC TGTTCTCCAT TTCGCCGTTA TAAATTTTCT
TTAGACTTAC TCAAGTGGTT AAAAATTCAC GCCTATGAGT ATGATATAGC CCATATTCAT
GCTTTATTTT CTCCTGTAAG TAGTGCGGCA GCTACTGTAT GTCGCCAACA AAAGTTACCT
TATATTTTGC GCCCTTTGGG TACTCTTGAC CCGGCTGATT TAGAGAAGAA AAAGCAATTG
AAAAAGCTAT ATGTGGAAAT TATCGAACGG CGTAATTTAG CTGGTGCAGC AGCAATTCAT
TTTACTAGTC AACAAGAAGC AAAAGTATCA GCCAGATTTG GTGTAGTGAC ACGGGATTTA
GTCATTCCTT TGGGTGTGAT TCCCCCGCCG AAGAAAGCAG AAAATACTTT AATTATTCAG
TTGGGAATTC CAGAGAATAT CCCGTTAATA TTATTTATGT CGCGGATTGA CCCAAAAAAA
GGGTTAAACT TATTAATACC TGCGTTAGAG AAGCTATTAG CAATTGGGAA TAACTTTCAC
TTTATCTTGG CTGGGACTAA TCCCCAAGAC CCAGATTATG AACAGCAAAT AAAAGACCAA
ATTACTAACT CATCACTGCG ATCGCATTCT ACCATCACAG GTTTTGTTAC TGGTGAGTTA
AAAGCTAGTT TACTACAAGC GGCTGATTTA TTCGTCCTAC CTTCATACTA TGAAAACTTT
GGTATTGCGG TCGCTGAGGC AATGGTAGCA GGTGTACCTG TCGTTATTTC CGACCAAGTG
CATATTTGGC AACAGGTACG CGATAGTGAG TCAGGCTGGG TAGGGACAAC AGATGTAGAA
TCACTGATAG AACTGTTACA ACAAGCACTA CAAAATCCCC AAGAATGCCA ACGCCGGGGA
CTCAACGCCC AAAATTATGC CTTACAAAAT TTTAGCTGGG ATGCGATCGC CCAGCAAATG
ATCCAAGCCT ACCAAACAAT CATCAAAACT TGA
 
Protein sequence
MKILQIVPSI SLIYGGPSQM VLGLSPALVK AGATVTIITT DSNGDSGQKP LDVPLNVPIK 
QDGYEIIYFR CSPFRRYKFS LDLLKWLKIH AYEYDIAHIH ALFSPVSSAA ATVCRQQKLP
YILRPLGTLD PADLEKKKQL KKLYVEIIER RNLAGAAAIH FTSQQEAKVS ARFGVVTRDL
VIPLGVIPPP KKAENTLIIQ LGIPENIPLI LFMSRIDPKK GLNLLIPALE KLLAIGNNFH
FILAGTNPQD PDYEQQIKDQ ITNSSLRSHS TITGFVTGEL KASLLQAADL FVLPSYYENF
GIAVAEAMVA GVPVVISDQV HIWQQVRDSE SGWVGTTDVE SLIELLQQAL QNPQECQRRG
LNAQNYALQN FSWDAIAQQM IQAYQTIIKT