Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1362 |
Symbol | |
ID | 3682871 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1679117 |
End bp | 1680289 |
Gene Length | 1173 bp |
Protein Length | 390 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637716700 |
Product | glycosyl transferase, group 1 |
Protein accession | YP_321881 |
Protein GI | 75907585 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0438] Glycosyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0392501 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0175449 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAAATTT TACAAATTGT CCCATCTATT TCTTTGATTT ATGGCGGACC TAGTCAAATG GTATTGGGAC TATCACCAGC GTTAGTAAAA GCAGGTGCGA CAGTTACAAT CATTACAACT GATAGCAATG GTGATAGTGG TCAAAAACCT TTAGATGTGC CTTTAAATGT TCCCATTAAA CAAGATGGTT ATGAAATAAT ATATTTTCGC TGTTCTCCAT TTCGCCGTTA TAAATTTTCT TTAGACTTAC TCAAGTGGTT AAAAATTCAC GCCTATGAGT ATGATATAGC CCATATTCAT GCTTTATTTT CTCCTGTAAG TAGTGCGGCA GCTACTGTAT GTCGCCAACA AAAGTTACCT TATATTTTGC GCCCTTTGGG TACTCTTGAC CCGGCTGATT TAGAGAAGAA AAAGCAATTG AAAAAGCTAT ATGTGGAAAT TATCGAACGG CGTAATTTAG CTGGTGCAGC AGCAATTCAT TTTACTAGTC AACAAGAAGC AAAAGTATCA GCCAGATTTG GTGTAGTGAC ACGGGATTTA GTCATTCCTT TGGGTGTGAT TCCCCCGCCG AAGAAAGCAG AAAATACTTT AATTATTCAG TTGGGAATTC CAGAGAATAT CCCGTTAATA TTATTTATGT CGCGGATTGA CCCAAAAAAA GGGTTAAACT TATTAATACC TGCGTTAGAG AAGCTATTAG CAATTGGGAA TAACTTTCAC TTTATCTTGG CTGGGACTAA TCCCCAAGAC CCAGATTATG AACAGCAAAT AAAAGACCAA ATTACTAACT CATCACTGCG ATCGCATTCT ACCATCACAG GTTTTGTTAC TGGTGAGTTA AAAGCTAGTT TACTACAAGC GGCTGATTTA TTCGTCCTAC CTTCATACTA TGAAAACTTT GGTATTGCGG TCGCTGAGGC AATGGTAGCA GGTGTACCTG TCGTTATTTC CGACCAAGTG CATATTTGGC AACAGGTACG CGATAGTGAG TCAGGCTGGG TAGGGACAAC AGATGTAGAA TCACTGATAG AACTGTTACA ACAAGCACTA CAAAATCCCC AAGAATGCCA ACGCCGGGGA CTCAACGCCC AAAATTATGC CTTACAAAAT TTTAGCTGGG ATGCGATCGC CCAGCAAATG ATCCAAGCCT ACCAAACAAT CATCAAAACT TGA
|
Protein sequence | MKILQIVPSI SLIYGGPSQM VLGLSPALVK AGATVTIITT DSNGDSGQKP LDVPLNVPIK QDGYEIIYFR CSPFRRYKFS LDLLKWLKIH AYEYDIAHIH ALFSPVSSAA ATVCRQQKLP YILRPLGTLD PADLEKKKQL KKLYVEIIER RNLAGAAAIH FTSQQEAKVS ARFGVVTRDL VIPLGVIPPP KKAENTLIIQ LGIPENIPLI LFMSRIDPKK GLNLLIPALE KLLAIGNNFH FILAGTNPQD PDYEQQIKDQ ITNSSLRSHS TITGFVTGEL KASLLQAADL FVLPSYYENF GIAVAEAMVA GVPVVISDQV HIWQQVRDSE SGWVGTTDVE SLIELLQQAL QNPQECQRRG LNAQNYALQN FSWDAIAQQM IQAYQTIIKT
|
| |