Gene Ava_1358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1358 
Symbol 
ID3682867 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1674413 
End bp1675051 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID637716696 
Product1-Cys peroxiredoxin 
Protein accessionYP_321877 
Protein GI75907581 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0450] Peroxiredoxin 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000104768 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0118722 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCTCC GTCTTGGTGA TACAGTACCC AACTTTACAC AAGCCTCAAC ACACGGCGAT 
ATAGATTTTT ATGAATGGGC TGGTGACAGC TGGGTTGTGC TGTTTTCTCA CCCTGCTGAC
TATACTCCAG TTTGCACAAC AGAATTAGGA ACAGTTGCCA AACTGAAACC AGAATTTGAC
AAACGCAATG TGAAAGCGAT CGCTCTCAGC GTTGATGATG TAGAATCTCA CAAAGGCTGG
GTAGGCGACA TCGAAGAAAC TCAAAGCACC ACCCTTAATT ACCCCATTTT GGCAGACGCA
GATCGTAAAG TTTCCGACCT TTACGACATG ATTCACCCCA ACGCTAACGC AGCTGTAACA
GTGCGTTCAG TATTTGTGAT TGATCCCAAC AAAAAACTGC GTCTTTCATT CACCTATCCC
CCCAGCACCG GACGTAACTT TGATGAACTG TTGCGGGTAA TTGATTCCTT GCAACTCACC
GATAACTACA GCGTAGCCAC CCCAGCAGAC TGGAAAGATG GCGACAAGGT TGTTATCGTC
CCCTCCCTCA AAGACCCTGA AGTCTTGAAA GAAAAATTCC CCAAAGGTTA CGAAGTAGTC
AAACCCTATC TGCGGTTAAC TCCTCAACCT AACAAATAA
 
Protein sequence
MALRLGDTVP NFTQASTHGD IDFYEWAGDS WVVLFSHPAD YTPVCTTELG TVAKLKPEFD 
KRNVKAIALS VDDVESHKGW VGDIEETQST TLNYPILADA DRKVSDLYDM IHPNANAAVT
VRSVFVIDPN KKLRLSFTYP PSTGRNFDEL LRVIDSLQLT DNYSVATPAD WKDGDKVVIV
PSLKDPEVLK EKFPKGYEVV KPYLRLTPQP NK