Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1358 |
Symbol | |
ID | 3682867 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1674413 |
End bp | 1675051 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637716696 |
Product | 1-Cys peroxiredoxin |
Protein accession | YP_321877 |
Protein GI | 75907581 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0450] Peroxiredoxin |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00000000104768 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0118722 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTCTCC GTCTTGGTGA TACAGTACCC AACTTTACAC AAGCCTCAAC ACACGGCGAT ATAGATTTTT ATGAATGGGC TGGTGACAGC TGGGTTGTGC TGTTTTCTCA CCCTGCTGAC TATACTCCAG TTTGCACAAC AGAATTAGGA ACAGTTGCCA AACTGAAACC AGAATTTGAC AAACGCAATG TGAAAGCGAT CGCTCTCAGC GTTGATGATG TAGAATCTCA CAAAGGCTGG GTAGGCGACA TCGAAGAAAC TCAAAGCACC ACCCTTAATT ACCCCATTTT GGCAGACGCA GATCGTAAAG TTTCCGACCT TTACGACATG ATTCACCCCA ACGCTAACGC AGCTGTAACA GTGCGTTCAG TATTTGTGAT TGATCCCAAC AAAAAACTGC GTCTTTCATT CACCTATCCC CCCAGCACCG GACGTAACTT TGATGAACTG TTGCGGGTAA TTGATTCCTT GCAACTCACC GATAACTACA GCGTAGCCAC CCCAGCAGAC TGGAAAGATG GCGACAAGGT TGTTATCGTC CCCTCCCTCA AAGACCCTGA AGTCTTGAAA GAAAAATTCC CCAAAGGTTA CGAAGTAGTC AAACCCTATC TGCGGTTAAC TCCTCAACCT AACAAATAA
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Protein sequence | MALRLGDTVP NFTQASTHGD IDFYEWAGDS WVVLFSHPAD YTPVCTTELG TVAKLKPEFD KRNVKAIALS VDDVESHKGW VGDIEETQST TLNYPILADA DRKVSDLYDM IHPNANAAVT VRSVFVIDPN KKLRLSFTYP PSTGRNFDEL LRVIDSLQLT DNYSVATPAD WKDGDKVVIV PSLKDPEVLK EKFPKGYEVV KPYLRLTPQP NK
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