Gene Ava_1341 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1341 
Symbol 
ID3682928 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1651747 
End bp1652553 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content35% 
IMG OID637716679 
Producthypothetical protein 
Protein accessionYP_321860 
Protein GI75907564 
COG category[R] General function prediction only 
COG ID[COG2842] Uncharacterized ATPase, putative transposase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.720259 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.280158 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAAACG AAGAAATACA GCAAGAGATT GAACGGCTTA GACAACCAGA TATTTTAAAC 
CTCGAACAAG TAAAAAGATT TAGTTCTTGG TTAGATGAAA GAAGAAAGTT ACGAAAACCC
GGTAGAGCAG TAGGAGAGTC AGGACTGGGT AAAACTACAG CTTCTCTTTT TTATACTTAC
CAAAATAGAG CGGCTAAAAT CCCCAATCAA AACCCAGTCG CGCCCGTACT ATATGTAGAG
CTAATAGGTA GTTCTTGCAG CCCATCTCTT TTGTTTAAAA CTATTATTGA AACTCTAAAA
TTTAAGGCTA AGGGTGGCAC TGAAAATCAA CTGAGAGAAC GGGCATGGTA TTTGATTAAA
CAATGTAAAG TAGAAATGTT AATTATTGAT GAAGCCCATC GTCTTCAATT TAAAACACTC
ACAGATGTTA CAGATTTATC TGATAAGGTA AAAATTATTC CAATTTTAGT AGGTACAAGT
AGCAGATTAG ATGCCTTAAT TAGTAAAAAT GAGCAAGTTG GTGGACGTTT TGCAGCATAC
TTCAGTTTTG AACAACTTTC AGGCGCTAAC TTTATAAAAA CGGTAAAGAT TTGGGAACAG
CAAATTCTGA AACTACCTGA GCCATCAAAT TTAGCAGAGA ATCAAGAAAT CATAACTATT
TTACAGGCAA AAACTGCTGG GCAAATTAGA TTACTAGACC AAATTCTTAG AGATGCAGCA
GTAAAAGCAT TAGAATCTGG TGTTAACAAA ATTGATAAGT CACTTTTAAA TAGTATTGAA
GGTGATTATT CATTAGTGGC AAGCTAA
 
Protein sequence
MTNEEIQQEI ERLRQPDILN LEQVKRFSSW LDERRKLRKP GRAVGESGLG KTTASLFYTY 
QNRAAKIPNQ NPVAPVLYVE LIGSSCSPSL LFKTIIETLK FKAKGGTENQ LRERAWYLIK
QCKVEMLIID EAHRLQFKTL TDVTDLSDKV KIIPILVGTS SRLDALISKN EQVGGRFAAY
FSFEQLSGAN FIKTVKIWEQ QILKLPEPSN LAENQEIITI LQAKTAGQIR LLDQILRDAA
VKALESGVNK IDKSLLNSIE GDYSLVAS