Gene Ava_1329 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1329 
Symbol 
ID3682975 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1637824 
End bp1639686 
Gene Length1863 bp 
Protein Length620 aa 
Translation table11 
GC content45% 
IMG OID637716667 
Producthypothetical protein 
Protein accessionYP_321848 
Protein GI75907552 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAT CTAATAAAAA AATTCCCCCA GCCGGACAAG TGCGCCAAAG TCAAATCCTT 
TCTACCTTTG GGCCTGGGGC GATGGTAGAC TTACCCGAAC ATTCCGTGTT AATTGCTGGT
TTAAATCACT GGCGTGGCGA CAGAAGGCGT ATCTTTGAAG ACCGATTAGC AACTAGAGTT
GCTGAAATTT TAGAAGTCAA CAATATTAAG CTGTATGCGC CGCCAGTTGA CGAACAAGAT
CCCAAAGCCC CCCGCACAGG GATTAATGCT TTCATGTTCC CTACTTGGTT TTTAGCCCAA
GTCAAGGAAA CTTGGTACGA CACCAAAACC AAAAAAACAT TCCGCACTCG CCCTCTGTTA
CCGTGGGGTA ATTTGGTAAG TGGTAAATAT CTGAGTGCTG AGAAAAAGTC TATACCAGTT
GTACCCGTCC GCTTTGTGCA AGCCTGCGTT AAAGGTCATA TTAGCGATAT TGACTGGTAT
CGTTTTGCCC ATAATGACGC TGAAAATAAG TGTCGAGGTC AGCTATGGTT AGACGAAGGT
GGTTCAGGTA ACGACTTCGC TGAGATTTAT GTGCGTTGCG AAGCCTGTAA AAAACGCCGT
CCCCTTGCTG ATGCAACAGT TCGCAACGGT AAAGTCTTAG GCCCATGTCA GGGACATCGC
CCTTGGCTTG GTTCTTTTGC CCAAGAACCT TACTGTATTC GGGAATCAAC AGGTCTACCA
GAGTACAACC GCTTATTAGT TAGGTCTGCC AGTAACGCCT ATTTTTCGCA AATTCTCAGC
GTTATTTCCC TTCCTGACCT AGATGCAGGT TTACGAGATG CAGTGAATTT AGTTTACGAA
GATTTTCTGC AATATGCGGA AAGCGTCAGC GATGTGAAAA AGGAGCGCAA AAAACAAAAG
GTAACTGTAG CTTTAGAACA ATTTAGTGAT GAAGCCGTCT GGGAAGAAGT ACAACGGCGA
CAAAGTGGGC AAGGAAAACC ACATAAAAGC ATTAAGCAAG TGGAAATAGA GACATTGCTT
TCTAGCTCCC TTGACGTTGG GGAAGATGTC CCAGACAAAG ATTTTTATGG TAGGTCGCGT
AGTTTGGACA ACTTACAGCC TGCGTTTGCC TCCTGCATTG AACGAATTGT TTTAGTACAT
CGTTTACGTG AAGTAATTGC CCAGGTGGGT TTTACTCGCT TTGAAGCGGA AATGCCAGAT
ATCGATGGCG AACTTGATAT CAGCGTCAGG CGTGCTTTGC TGGATATTGA AACTACTTGG
GTTCCTGCAA TTGAGAATAA AGGTGAGGGT GTATTTATTG CTTTCCGTCA GGAAGCGATT
GAAGATTGGT TAAAACGAGA AGCCGTTAAA AAACGGGGAA GAGAATTATC AAGAGGATTT
GATATTTGGT GTGCGCGTAA AGGTATCGAC CAGGAAAAAG AAAAAGTTAA GTTTCCTGGC
TTGCCGTATA TTATGCTGCA TTCTCTATCA CATTTATTGA TTGTGGCTGT ATCGTTAGAA
TGCGGCTATG CGGCTAGTTC CATCCGCGAA CGCATCTATG CTGGTGAATC TGGTTATGGC
ATTCTTTTAT ACACTGGTTC ATCTGGTTCA GAAGGGACTT TAGGCGGACT GGTAGAAGTT
GGCAAACGCA TTGAATACCA TTTGGAAGTA GCACTAGAGC AAGGAAGATT ATGCTCCAAT
GACCCAGTAT GCGCCCAACA TCGCCCAGAT AACGAGCAAG AGGAGCGTTT TCTGCACGGT
TCGGCTTGTC ACGGATGCTT ACTAATTGCA GAAACATCCT GCGAACGCCG CAATGAATTT
CTTGACCGCG CCTTGGTTGT CTCTACAGTT GAAGGTTTAG GAGCAGAGTT TTTCCCAGAA
TAA
 
Protein sequence
MSKSNKKIPP AGQVRQSQIL STFGPGAMVD LPEHSVLIAG LNHWRGDRRR IFEDRLATRV 
AEILEVNNIK LYAPPVDEQD PKAPRTGINA FMFPTWFLAQ VKETWYDTKT KKTFRTRPLL
PWGNLVSGKY LSAEKKSIPV VPVRFVQACV KGHISDIDWY RFAHNDAENK CRGQLWLDEG
GSGNDFAEIY VRCEACKKRR PLADATVRNG KVLGPCQGHR PWLGSFAQEP YCIRESTGLP
EYNRLLVRSA SNAYFSQILS VISLPDLDAG LRDAVNLVYE DFLQYAESVS DVKKERKKQK
VTVALEQFSD EAVWEEVQRR QSGQGKPHKS IKQVEIETLL SSSLDVGEDV PDKDFYGRSR
SLDNLQPAFA SCIERIVLVH RLREVIAQVG FTRFEAEMPD IDGELDISVR RALLDIETTW
VPAIENKGEG VFIAFRQEAI EDWLKREAVK KRGRELSRGF DIWCARKGID QEKEKVKFPG
LPYIMLHSLS HLLIVAVSLE CGYAASSIRE RIYAGESGYG ILLYTGSSGS EGTLGGLVEV
GKRIEYHLEV ALEQGRLCSN DPVCAQHRPD NEQEERFLHG SACHGCLLIA ETSCERRNEF
LDRALVVSTV EGLGAEFFPE