Gene Ava_1318 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1318 
Symbol 
ID3682964 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1617874 
End bp1618365 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content41% 
IMG OID637716656 
Producthypothetical protein 
Protein accessionYP_321837 
Protein GI75907541 
COG category[S] Function unknown 
COG ID[COG4446] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.000275052 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTACGTC TACTAAAACC TTTCGCTTTT CGCCAACTCC TATGGGGTAT GGTTTCGGCA 
GTATTATTCT TGACAAGTAT GGTCATATTT CCTGCACCTA CTTGGGCTTC TCATTCTGGG
TTGGGGGTTG ATAGCGGTCA TTTAAGTGCT TGTCCAAGTT CCCCAAATTG TGTTGTCAGT
CAAAATGCTG ATCCTAAACA CGCCATTGAA CCAATTCCCT ATCATGTAGA CCGCGACAAA
GCACGAGAAA CTTTACTCAA GGTGTTGACA GTTGTACCGC GTACGGAGGT TGTAGAACAG
ACTGATAACT ATATCCATGC CCTTTCTAAG AGCCGTATTT TTAAATTTGT TGATGATGTA
GAATTTTACT TACCTACAAA TGAGTCAGTA ATTCATCTGC GATCGGCATC TCGTATCGGA
GATTCGGATC TTGGTGTTAA TCGTAGGCGT ATGGAGCAAA TTCGTCTAGC TTTACAGGAT
TTGAATATTT AA
 
Protein sequence
MLRLLKPFAF RQLLWGMVSA VLFLTSMVIF PAPTWASHSG LGVDSGHLSA CPSSPNCVVS 
QNADPKHAIE PIPYHVDRDK ARETLLKVLT VVPRTEVVEQ TDNYIHALSK SRIFKFVDDV
EFYLPTNESV IHLRSASRIG DSDLGVNRRR MEQIRLALQD LNI