Gene Ava_1315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1315 
Symbol 
ID3682961 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1614382 
End bp1614828 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content45% 
IMG OID637716653 
Productpeptidoglycan-binding LysM 
Protein accessionYP_321834 
Protein GI75907538 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.25781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGCAAG TTAATTGTCC TGTGTGCAGT TACCAAGATA TTACAGGCGA TACTTGCCCC 
AATTGTGATG CCGATTTGCG TGTAATTCGG ATGCTGCAAG CGTTACCGCA AGTCCCGACT
CAATCGCCTT GGCCATTAAG AATTGCCCTG TTGCTGCTAA TTATTGCCAT AGGTGTGGGA
GTGGCGACGA ATTTGATATT TTCTCGACCG CAGTTAAATA CAGTAGTTAT TACTCAACCC
AGCCCTGTTA CACCCCAAAA ACCCCCAGAA CCAACCACCT ACACAGTTCA ACCAGGAGAT
AATCTCAGTA CGATCGCGCA AAAATTGTGT GGTCAGGGAG TTTCTTTGCC AGCAATAGTA
CAAGCCAACC CCCAACTCAT AGGTAGAGAA AATTATCTAG AAGTGGGACA GGTGTTGAAA
ATTCCTAAGT GCCAGGAGGG TATTTGA
 
Protein sequence
MMQVNCPVCS YQDITGDTCP NCDADLRVIR MLQALPQVPT QSPWPLRIAL LLLIIAIGVG 
VATNLIFSRP QLNTVVITQP SPVTPQKPPE PTTYTVQPGD NLSTIAQKLC GQGVSLPAIV
QANPQLIGRE NYLEVGQVLK IPKCQEGI