Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1315 |
Symbol | |
ID | 3682961 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1614382 |
End bp | 1614828 |
Gene Length | 447 bp |
Protein Length | 148 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637716653 |
Product | peptidoglycan-binding LysM |
Protein accession | YP_321834 |
Protein GI | 75907538 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.25781 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATGCAAG TTAATTGTCC TGTGTGCAGT TACCAAGATA TTACAGGCGA TACTTGCCCC AATTGTGATG CCGATTTGCG TGTAATTCGG ATGCTGCAAG CGTTACCGCA AGTCCCGACT CAATCGCCTT GGCCATTAAG AATTGCCCTG TTGCTGCTAA TTATTGCCAT AGGTGTGGGA GTGGCGACGA ATTTGATATT TTCTCGACCG CAGTTAAATA CAGTAGTTAT TACTCAACCC AGCCCTGTTA CACCCCAAAA ACCCCCAGAA CCAACCACCT ACACAGTTCA ACCAGGAGAT AATCTCAGTA CGATCGCGCA AAAATTGTGT GGTCAGGGAG TTTCTTTGCC AGCAATAGTA CAAGCCAACC CCCAACTCAT AGGTAGAGAA AATTATCTAG AAGTGGGACA GGTGTTGAAA ATTCCTAAGT GCCAGGAGGG TATTTGA
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Protein sequence | MMQVNCPVCS YQDITGDTCP NCDADLRVIR MLQALPQVPT QSPWPLRIAL LLLIIAIGVG VATNLIFSRP QLNTVVITQP SPVTPQKPPE PTTYTVQPGD NLSTIAQKLC GQGVSLPAIV QANPQLIGRE NYLEVGQVLK IPKCQEGI
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