Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1314 |
Symbol | |
ID | 3682960 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1611653 |
End bp | 1614382 |
Gene Length | 2730 bp |
Protein Length | 909 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 637716652 |
Product | peptidase M, neutral zinc metallopeptidase, zinc-binding site |
Protein accession | YP_321833 |
Protein GI | 75907537 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.917609 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAACCTGC TGGAAAGCTT GAATAGATTA ACTAAAAATC ATTTGGGGAT AGGAATTGTT GATGCTTGGT TGCAAGCACC ACAAACGAGA GAAGCTAGCC AAAAAGCAGC ACAACTAGCT CAAACAAAAC ACCTACGGGA GGCTGTCACC ATAGCCGAAA AAGCCCTGAG TTGTTGGTCA AGAAAACCGG GGTTTTGGGA ACGGTTGATT TGCCAAATCC TCTTAGGTAA GTTGGTCAAT CAACTAACTC AGCAATTACA AGAATGGCGC AAACAAGTAG GGACAGTTGA CAAACAACTT GCTAGCGCTA AAACTCTACT CAAACAAGAT ACTGGCGATC CTTGGGAAAC AACAAACCTG ACAAATATCA TCACCATTTA TCAGCGTTGT AGCAAAATTA TCCACGACGA GAGGATATTG CAAGCCATTC AACAATGTCA ACAAGAACTA CAGAAACGCC AACAGTTCCA AGAATTGGTA AAGCAAGCCC AATCTCTGGT AGAAAATCTG TTTTTTAAAA ATGCGATCGC CACTTACCAG CAAGCTGAAG AACTTTACTC CACCCAGCTA CTAACTCAAG CCATTGCTAC CGCTACACAG CAAGTTCCAC AAGAAGAAGC TTACGACGCT AGTTTACAAA GAGTGCGACA GGGAGAGACG GAAGGAAAGT TACGGGGAGC GATCGTACTT TTAGAATCTG CTTTAGCAAA ATTTCCCCGC ACCGACGGCC ATGAGTTACT ACACAAACTT AAATCACTCG TTCAAGGTAG AGAACTATTT CGCCGAGGTT TAGCCGCAGA AAAAATTGGT GATTTCCCAA CAGCGATTTC TTTATATACA AATGCTGAAT CTCTATTACC AGAAAACACT AACTGCCGTA TCAGGTTAGG CTTAGTCACA ATTAAAACTC AAGCATGGGA AACAGCGCTA TCTTACTTGG AAGATTTACC GGGAGAACAA GCTGCATATC TAAGGGGATT TGTGTATGCA CAACAGGAAA ATTTACAAAT AGCTTATCGA GAATGGCAAG GATTATCGGG CGCACAAATC AGTGAACAAC GAGAAATACT CAAAATTCTC AGCCAAAGAC AACGCCTGTT TTCTCTACAA AATATTGAAG AATTAGTTAA AGCCGAAAAT CTAGAACAAG CAAAAATAGC CAGTAGAGAA TTTACCCAAA AATTTGGTTT TCATCAGTTA GTAGAAGAAA ATCTCCAAGA ACATATCCAG CCACGTCTTG AAGCGGCAGT TTGGCAAAGA GCTAACTGGC AATTGATTAG CCAACAAGCT GAAAATTATT GGATTGCCGA ACCTAATATT ATTACCTTAC ATAATTGGGC AGTGGCAAAT TATTATCACG CTCAACAGGA TTCAAATCAA ATCATAAATT TAATTATTTC TTTATCCACA GCTTTAGCAA ATCTGCATAA AGATATAAAT CTTCAAGATG TGCCTTGGCT AGGAACACAA TCTGTTGATT TTCAATTAGT ATTTAATCAA GTCAAAAACA GAATAGAAAC ATTTATCGAT ACTATAAAAG ACAAAAATAT TGAAGATTAT CTAAAGTTTC GTGATTGCTG GCGATTGGAA ACATTAGCTT TGGATTTAAT GGATCAACCT CCAATCAAAG GCATAAAAAT GAACGATATA TTTTTAACTC CCGGTTGTTA CAACCATTAT CTTAAATTCG ATCCAAGCAA TAATTTTAAC TCAATAGAGC CTCACCAAAA AATCCTACAT TGCTTATACA CAAATTGGGG ATTAGCAGTA GCAGCTTGTG TGGCGGGAGA TAGCCAAAGA GCAATTAAAC TTAAACCTAT AAATCTAGCA ACTTCTGATT TAGAAATATT TGCTCATAAC TTTGTTGCTT ACCATGAAGG ATGCTATCAC CTACAGCAAC AGAAATGGCG TGAGGCAATT CATCCACTCA ACCAAGCAAA GTCAGAAATT CTGGCTAATC AAGAATGGCA AATAGAACTA GATAGACTTT GCAGCTTACA GCGTCAAAAT ATCTCTGAAG ACCACGAACA TTTAGTTTTT GCTCAATTTT GGTACGATAT TTTAAATAGC ACTAAGGCTA GAGCTTATTT AGGTGAATAC AAAGCAGAAA GAATCCGAGA GCAACTTGCT AGTAAACAAA TATCTAAGCA AAAAGCTCTT AAAGAACTAG AGAGAATTAA ACTAATTGAT GCTGACAACC CTATTGTAAT AGATTTAATT CAGCGAATTG AAGTGGCATT GGCAGTAGAA GTCATTGAGG AATTTTTAAA TAAAAATAAT CTAGAAGGAG CCGTTAAATT TGCAAAACAG AATCAATATC TGAAGGTTAA AAATATAGTC ACTGAAATTT GTGTAGATAT TTTAGTTGAT GGATTTAAAA GCGGAAAATT GGGCTTTGAA GAGATTTATG ATTTAGGTCG TTGGGCTTAT GAACTTAGTC CTGATGAGCC AAATATCCAA GAAATCTATC TGATTAGCCA AGAACTCCAT GAAATCCATC ATCTCATTAA ACGCGATCGC TATGAAGAAG CCGTCCGCCG TGCCAAGTAT TCAGAATATG ACGCTATTCA TTCCTATGTC GGCGATTATT TGATGATGAC CTTGATTAGA GGAATGAAAA GTGAAACATT ATCTACCCAT TTAGTCCATC AATTAGGTCG TTGGGTTTAT CAACTCTGTC CCCATGACCC AGATTATCAA GAAATCTACC GCCGACTGAA TATTCGTTGA
|
Protein sequence | MNLLESLNRL TKNHLGIGIV DAWLQAPQTR EASQKAAQLA QTKHLREAVT IAEKALSCWS RKPGFWERLI CQILLGKLVN QLTQQLQEWR KQVGTVDKQL ASAKTLLKQD TGDPWETTNL TNIITIYQRC SKIIHDERIL QAIQQCQQEL QKRQQFQELV KQAQSLVENL FFKNAIATYQ QAEELYSTQL LTQAIATATQ QVPQEEAYDA SLQRVRQGET EGKLRGAIVL LESALAKFPR TDGHELLHKL KSLVQGRELF RRGLAAEKIG DFPTAISLYT NAESLLPENT NCRIRLGLVT IKTQAWETAL SYLEDLPGEQ AAYLRGFVYA QQENLQIAYR EWQGLSGAQI SEQREILKIL SQRQRLFSLQ NIEELVKAEN LEQAKIASRE FTQKFGFHQL VEENLQEHIQ PRLEAAVWQR ANWQLISQQA ENYWIAEPNI ITLHNWAVAN YYHAQQDSNQ IINLIISLST ALANLHKDIN LQDVPWLGTQ SVDFQLVFNQ VKNRIETFID TIKDKNIEDY LKFRDCWRLE TLALDLMDQP PIKGIKMNDI FLTPGCYNHY LKFDPSNNFN SIEPHQKILH CLYTNWGLAV AACVAGDSQR AIKLKPINLA TSDLEIFAHN FVAYHEGCYH LQQQKWREAI HPLNQAKSEI LANQEWQIEL DRLCSLQRQN ISEDHEHLVF AQFWYDILNS TKARAYLGEY KAERIREQLA SKQISKQKAL KELERIKLID ADNPIVIDLI QRIEVALAVE VIEEFLNKNN LEGAVKFAKQ NQYLKVKNIV TEICVDILVD GFKSGKLGFE EIYDLGRWAY ELSPDEPNIQ EIYLISQELH EIHHLIKRDR YEEAVRRAKY SEYDAIHSYV GDYLMMTLIR GMKSETLSTH LVHQLGRWVY QLCPHDPDYQ EIYRRLNIR
|
| |