Gene Ava_1308 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1308 
Symbol 
ID3683051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1608197 
End bp1609480 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content44% 
IMG OID637716646 
Productvon Willebrand factor, type A 
Protein accessionYP_321827 
Protein GI75907531 
COG category[R] General function prediction only 
COG ID[COG2304] Uncharacterized protein containing a von Willebrand factor type A (vWA) domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTTC AATTGCTAAG AGCGTTAAGT GATACTAATA TTGATGCCAC TCAATTGAGC 
AGCCAGCGTC AATTGGCAAT TTCCATTTCT GCTGTCGCCG AGCAGTTTGA GCAAAATTTA
CCACTCAATT TATGCTTGAT TTTGGATCAA AGTGGTTCCA TGCACGGTAA ACCGTTGAAA
ATGGTAATTG CGGCTGTTGA GAGATTATTA GATAGGTTAC AGCCAGGCGA TCGGATTTCA
GTTGTGGCGT TTTCTGGGTC TGCGACAGTC ATTATCCCCA ACCAAATAGT CGAAGACCCC
GAAAGTATCA AAACCCAAAT TAGAAAGAAG CTACAGGCTA GCGGCGGTAC AGTTATTGCT
GAGGGTTTGC AACAGGGAAT TACAGAACTG ATGAAGGGGA CAAGAGGGGC TGTTTCCCAA
GCATTTCTCC TTACCGATGG TCATGGTGAA GATAGTCTCA AAATTTGGAA GTGGGAAATC
GGCCCAGATG ATAGCAGGCG TTGTCAGGAA TTTGCCAAGA AGGCGGCAAA AATCAACCTC
ACTATCAATA CTTTGGGCTT TGGTAATAAT TGGAATCAGG ATTTATTAGA AACAATTGCT
GATGCTGGTG GTGGGACTCT AGCTCACATT GAGCGTCCAG AACAAGCTGT CCATCACTTT
AATCGCCTGT TTGCGAGGGT GCAATCGGTG GGTTTAACTA ATGCTTACCT CATACTGTCT
CTTGCGCCCC AAGTCCGGCT AGCAGAACTG CGGCCTATTG CCCAAGTTGC CCCTGATATT
ATTGAGTTAC CTGTAGAACC AGAAGCAGAT GGGAGTTTTA TTATTCGTTT GGGAGATTTG
ATGAAAGATG AGAACCGGGT GGTTTTAGCG AATCTTTACC TGGGAAAGCT ACCGGAAGGA
CAGCAGGTAA TTGGTAATGT ACAAGTCCGC TATGATAATC CGAGTTTGAA TGAAGAGGGG
TTGCTTTCAC AAATTTGGCC GATATATGCA AATGTGATGC AGGCCTATCA AGCGGATTTC
GACCCCCATG TACATAAATC TATTTTGACA TTGGCTAAGT ATCGCCAAAC TCAATTAGCA
GAGACAAAAT TGCGTCAAGG CGATCGCTCT GGCGCAGCGA CAATGTTACA AACAGCAGCC
AAAACAGCTT TACAAATCGG CGATAATAAC GCAGCCACGG TTTTACAAAC TTCTGCTACC
CGCCTGCAAG CTGGGGAAAA ACTTTCAAAT GCAGATTTAA AGAAGACTAG AATCGTGTCG
AAGACAGTTT TACAAAGTTT TTAA
 
Protein sequence
MKVQLLRALS DTNIDATQLS SQRQLAISIS AVAEQFEQNL PLNLCLILDQ SGSMHGKPLK 
MVIAAVERLL DRLQPGDRIS VVAFSGSATV IIPNQIVEDP ESIKTQIRKK LQASGGTVIA
EGLQQGITEL MKGTRGAVSQ AFLLTDGHGE DSLKIWKWEI GPDDSRRCQE FAKKAAKINL
TINTLGFGNN WNQDLLETIA DAGGGTLAHI ERPEQAVHHF NRLFARVQSV GLTNAYLILS
LAPQVRLAEL RPIAQVAPDI IELPVEPEAD GSFIIRLGDL MKDENRVVLA NLYLGKLPEG
QQVIGNVQVR YDNPSLNEEG LLSQIWPIYA NVMQAYQADF DPHVHKSILT LAKYRQTQLA
ETKLRQGDRS GAATMLQTAA KTALQIGDNN AATVLQTSAT RLQAGEKLSN ADLKKTRIVS
KTVLQSF