Gene Ava_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1304 
Symbol 
ID3683047 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1604507 
End bp1605130 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content45% 
IMG OID637716642 
Productheat shock protein DnaJ-like 
Protein accessionYP_321823 
Protein GI75907527 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0484] DnaJ-class molecular chaperone with C-terminal Zn finger domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.456433 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCTCG GAGATTGCTA CCGTTTATTG GGTTTAAGGT CGGGAGCTTC ATTTGCTGAT 
ATTAAAGCCT CTTACCGACG GCTGGCGCAG CAATATCATC CTGATATCAA CCCTAGTGAT
AAAAAAGCTC AAGATAAGTT TATTGCCTTG ACTGAGGCTT ACAGATTTCT GTTGACGGTA
GTACCTCCAG AGGACACAGC CCCAAAGTCA AAGCAATCAC CTGCGTCTAG TAGTGAAAAT
ATCAAAGCAA CTCACTCAGA GAAAGCGCCT ACGGCTACCG TCACAGATGA AAAGTCAGCT
CCATCAAAAC CACCGAACAT TATAGAAATT GAACAACGGT TAAAGTGGAA GACTTACGAA
CAACTGCAAC GGTTTTTGCG GGAAAGAAGG TTTCCCCAAG CGATCGCCTT AGCAGAAGCT
TTAGCCGCCC GTTTACCAAA AGATCCAGAA GTACGCCAAT GGCAGGCGAT CGCCTATCAA
ATCTGGGGAC GCGCCCTCAT TAACGAAAAT CAACTCCTCA AAGCCAGAGT CTATCTCAAA
AAAGCTTTAA AAACTGACCC CCATAACAAG GCATTGTGGG AAGAGGTGCA ACGCGATTTC
CAAAAGTTGG AACAGATATT TTAG
 
Protein sequence
MDLGDCYRLL GLRSGASFAD IKASYRRLAQ QYHPDINPSD KKAQDKFIAL TEAYRFLLTV 
VPPEDTAPKS KQSPASSSEN IKATHSEKAP TATVTDEKSA PSKPPNIIEI EQRLKWKTYE
QLQRFLRERR FPQAIALAEA LAARLPKDPE VRQWQAIAYQ IWGRALINEN QLLKARVYLK
KALKTDPHNK ALWEEVQRDF QKLEQIF