| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1300 |
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| Symbol | |
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| ID | 3683043 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1600648 |
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| End bp | 1601844 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637716638 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_321819 |
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| Protein GI | 75907523 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.259686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAAAAGTA TTACTCTTGT TGGTTCCACT GGCTCAATTG GTACTCAGAC TCTAGATATC
GTGAGTCAGT ACCCAGATCA GTTTCGGATT GTGGGGTTGG CGGCGGGAAG CAATGTAGAA
ATGTTGGCAG AACAGATTCG CCAGTTCCGT CCCCAAATAG CAGCGATTTC TGCCGCCGAA
AAATTACCAG CACTGCAAGC AGCTATTAAA GACCTTGATC CCCAACCTAT TTTACTAGGG
GGCGAAGCCG GAGTGATCGA AGTTGCTCGT TACGGTGATG CCGAAACAGT GGTGACAGGT
ATTGTCGGTT GTGCTGGTTT ACTGCCAACA ATCGCCGCCA TTGAAGCTGG TAAAGACATT
GCCTTAGCAA ACAAAGAAAC TCTCATCGCC GGCGGGCCTG TAGTCTTACC CTTAGTAGAA
AAACACGGCG TTAAATTATT GCCAGCCGAT TCCGAACATT CTGCCATCTT CCAATGCCTC
CAAGGTGTAC CAAAAGGCGG CTTAAGGAAG ATTTTACTCA CGGCTTCCGG TGGTGCTTTT
CGGGATTGGG ATGTGGAAAG ATTAGCAGAA GTAACAGTGG CCGATGCCCT AAAACATCCT
AACTGGTCAA TGGGGCGAAA AATTACTGTA GACTCAGCCA CCCTGATGAA CAAAGGTTTA
GAAGTAATTG AGGCTCATTT TCTGTTTGGG TTAGATTATC AAGATATCGA AATTGTCATC
CATCCCCAAA GTATTATTCA TTCACTAATT GAGCTGCAAG ATACCTCAGT TTTAGCCCAA
CTCGGCTGGC CGGATATGCG CTTACCTTTG CTATATGCTT TGTCTTGGCC GGAACGCATC
TACACTGACT GGGAACCCTT AAATTTAGTC AAAGCTGGCA ATCTCACCTT CCGTGAACCA
GACCATCAAA AGTATCCTTG TATGCAGTTA GCTTATGCGG CTGGTAGGGC GGGTGGTTCC
ATGCCGGCAG TGTTAAATGC TGCTAATGAA CAGGTTGTAG CATTATTCCT AGATGAGAAA
ATCAAATTTT TAGATATTCC CCGGTGTATC GAATTAGTGT GCGATCGCCA TCAAAATGAT
AACTGTGCAA ATCCTTCTTT AGATGATATT TTGGCAGCAG ATCAATGGGC AAGACAAGAA
GTTTTAACAG CTACTAAAAA TTTAGCAAGC CAACCTCAGA TAATTTCCGT CAACTAA
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| Protein sequence | MKSITLVGST GSIGTQTLDI VSQYPDQFRI VGLAAGSNVE MLAEQIRQFR PQIAAISAAE
KLPALQAAIK DLDPQPILLG GEAGVIEVAR YGDAETVVTG IVGCAGLLPT IAAIEAGKDI
ALANKETLIA GGPVVLPLVE KHGVKLLPAD SEHSAIFQCL QGVPKGGLRK ILLTASGGAF
RDWDVERLAE VTVADALKHP NWSMGRKITV DSATLMNKGL EVIEAHFLFG LDYQDIEIVI
HPQSIIHSLI ELQDTSVLAQ LGWPDMRLPL LYALSWPERI YTDWEPLNLV KAGNLTFREP
DHQKYPCMQL AYAAGRAGGS MPAVLNAANE QVVALFLDEK IKFLDIPRCI ELVCDRHQND
NCANPSLDDI LAADQWARQE VLTATKNLAS QPQIISVN
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