Gene Ava_1299 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1299 
Symbol 
ID3683042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1598811 
End bp1600115 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content43% 
IMG OID637716637 
Producthypothetical protein 
Protein accessionYP_321818 
Protein GI75907522 
COG category[S] Function unknown 
COG ID[COG5542] Predicted integral membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.991942 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.99537 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAA AGCGAATATT CATCAAAAAA TTTTTATGGA AAACTGATTT TCTCTTTCCT 
GCAATCCTCT GGTTTCTTAG CCGCGTCCTG ATTTGGATAA CGATGTTGTT GGTTGCGCCG
AATTTACCTT CAGCACCAGA AAGTCTATCT AGCTTAGGTT GGGGAATTTT TGATGCTTGG
GATGGGGTGC ATTATAGGGC GATCGCCACT ACTGGATATG AATTTGTCGA TGACGGTAAG
CAGCACAATC TAGCATTCTT TCCCTTGTTT CCCTTCTGTA TCCGGGTATT AATGAATTTG
GGTTTGTCTT TTGAAGTAGC TGGTCTTTTA ATCAACAATG TGACATTTTT GGCAGCACTT
TATATTTTGT ACTTCTGGCT GAAAAATTCT TATGGAATCA GTATCGCTAG ATGGGCTACA
TCCGTGGTTT CTTGTTATCC ATCAGCGATG TTTACAGGGG TAATTTATAC AGAGGGACTA
TATTTGTTTT TAAGTACAGC CGCTTTACGG GCTTTTGATC AAAAGCAGTA TGGCTGGACA
AGCTTCTGGG GTGCCTTGGC GACAGCAACA CGTCCCACAG GAATGGCTAT GATTCCCGCA
TTGGCGATCG CTGCTTGGAA AGAACGCAGA CCACCAATTG CTTATATCGC AGGTTTAGCC
ACCGCAACAG GAGTCATGGT CTTTAGTTTA TATTGTGCCT TCCGCTTCCA CAATCCTCTC
GCCTTTATCG CTGCACAACG AGGCTGGCGA CCATCTCTAG GCTTTGATTG GCAAGGATGG
TTAGGTATGC TGATGAAAAT TGTCGTAGGG CCGCAAAACT GGCAGTTTGG TTGGGTTCAG
CCTACATCTG GTTGGATTAA TGATCCTTGG CATCCTTTGT TGTTTATTCT GATTGTTGGC
GGAGGATATT GTTTATACTT CTTCCGGCAG TATTTACACT CCGTCAAGAT CATTTATGGT
TGTTACATTT TATTGTTGTT TTTGTTACTA CTAGCACCAG AAGATTTAAT TAATCGCTTA
CTGAATGTAT TCATGGTCTT TGGTGGTAGT TGTGCGTTGT GGCGTTTCCG TAAAAACCTA
ACTACTGTAA CTGTTATGTA TGGCTTTTGC GGTATCGGAC TGCTGCTTGC TTCTGGGGGA
ACAATATCCT TAAGCCGCCT AGCTTATGGC ATCGTACCTT TGAGTATAGC GATCGGTGTG
CTGTTATCTC GCTATCCTCG TCAAGGATAT TTTGTTCTAG GTTTATTTAT CACACTACTC
GCTAGGTTAG CTGTGGGATT TGCTCAAGAA CAGTGGGTAG GGTAG
 
Protein sequence
MFEKRIFIKK FLWKTDFLFP AILWFLSRVL IWITMLLVAP NLPSAPESLS SLGWGIFDAW 
DGVHYRAIAT TGYEFVDDGK QHNLAFFPLF PFCIRVLMNL GLSFEVAGLL INNVTFLAAL
YILYFWLKNS YGISIARWAT SVVSCYPSAM FTGVIYTEGL YLFLSTAALR AFDQKQYGWT
SFWGALATAT RPTGMAMIPA LAIAAWKERR PPIAYIAGLA TATGVMVFSL YCAFRFHNPL
AFIAAQRGWR PSLGFDWQGW LGMLMKIVVG PQNWQFGWVQ PTSGWINDPW HPLLFILIVG
GGYCLYFFRQ YLHSVKIIYG CYILLLFLLL LAPEDLINRL LNVFMVFGGS CALWRFRKNL
TTVTVMYGFC GIGLLLASGG TISLSRLAYG IVPLSIAIGV LLSRYPRQGY FVLGLFITLL
ARLAVGFAQE QWVG