| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1297 |
|---|
| Symbol | |
|---|
| ID | 3683040 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1595806 |
|---|
| End bp | 1597353 |
|---|
| Gene Length | 1548 bp |
|---|
| Protein Length | 515 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637716635 |
|---|
| Product | glycosyl transferase family protein |
|---|
| Protein accession | YP_321816 |
|---|
| Protein GI | 75907520 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1807] 4-amino-4-deoxy-L-arabinose transferase and related glycosyltransferases of PMT family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 0.370889 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.221223 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGCCCAA TCACACAAAA AAAATTACTA TTAGTTTTGT TGGTTGCTGC TTTGGCTTTG
TGGCTCACAT TTTTAGGTAA CTTACCTTTA AGAGATTGGG ATGAGGGTAC CATAGCACAG
GTTGCTCGTG ACATTTGGCA GGCTCCAGTT GGTTCTATGC GTTGGCTTTA TCCCACCTTG
GCGGGGGAGG CCTATCATAA TAAGCCCCCT CTCATGCACT TATTAATTGC CTGGGCTTAC
TCGATTGGTG GTATCAATGA ATGGACAACA CGTTTTCCTG GCGCATTTAT CACTGCGCTG
GGAGTACCTT TGTTGTACTT GTTAGGGCGA TCGCTTTTTA ACCGCAGTCT ACCAGCCTTG
TTTGCGGCAT TAGTGTATTT AACTATGTTG CCTGTGGTAC GTCACGGAAG ACTAGCAATG
TTAGATGGTA CACTCATCAC CTTTTTTTTA TTCGTTTTGT TTTGTCTACT AAAAGCCCGC
CAAAATCAAA AATATGCTTT AGGTGTGGGT ATCGGTTTAG GGCTAATTGC TCTAACTAAA
GGGATGATGG TTTTGCTATT AGGTGGAATT GCAGGTTTGT TTCTTTTAGC AGATAGACAA
TTAACTTTAT TAACCAGCCC TTATTTATGG ACAGGGCTGT TTTTAGGAAG CGCGCCAGCG
ATCGCCTGGT ATCTTGCTCA ATGGCAACAT TACGGAGGTA GTTTTTTACA AATAAACTTG
CAATCACAAA CTTTTAACCG AGTTTTCCAA CCTGTAGAAG GACATAGCGG CCCACCTTGG
TACTATGTAT TGGAAATACT CAAATATGGT TTTCCGTGGC TATTGTTCTT GCCAGGAGGA
CTTTATTTAG CTGCAAAAAA GCGTGACACT TCCTGGGGGT GTTTAATTCT TGTCGGGACA
ATTGTTTATT TGGCAAGTAT TTCCGTGATG AGAACGAAAC TACCTTGGTA TGTTATGCCA
ATATATCCAT TTTTAGCTCT GGCCATTGGT GCTAAATTAG CTGATGTTTG GCAGTACCAT
CATGTTAAAT CAACAACTTT GGTAGTATTC TTTGTCATAC TGGCGATCGC AGGTTTAGGT
GGTTGTGTCT ACTTTGCGAC CACTGAAACC CAGCCTGTTC TAATTGCTAT GAGTCTTGTG
TTAGCCGTGA GTATGGCTAC GGTAGCATGG CTGGTTAATC AAGGCGATCG CAACTTTATT
CCAGTTTTGT TTACAGGAAT GTATTTAGTT TTAATTATGT TTGTGAGTTC CCAGTCATGG
ATTTGGGAGT TAAACGAAGC ATTTCCAGTT AAACCAGTCG CCGCATTAAT CCGCCAACAC
GTTTTACCAG GCACCAAGAT TTATACTTCT TTCGCCTATA ATCGCCCTAG TCTAGACTTT
TACTGTGATT GTCAAGTTCT GACTGAGCCA TCAATTTCAC AGCAAATGGC AAAAAGAAAT
GATTATTTGC TTTTAGATAA TACAACTTTA GAAAAGATAA ACTTATCTGG AAACGAAATT
CTAGGAACGG TGGAAAACTT TACTTTGATT GCTCCATCCA AAAATTAA
|
|---|
| Protein sequence | MRPITQKKLL LVLLVAALAL WLTFLGNLPL RDWDEGTIAQ VARDIWQAPV GSMRWLYPTL
AGEAYHNKPP LMHLLIAWAY SIGGINEWTT RFPGAFITAL GVPLLYLLGR SLFNRSLPAL
FAALVYLTML PVVRHGRLAM LDGTLITFFL FVLFCLLKAR QNQKYALGVG IGLGLIALTK
GMMVLLLGGI AGLFLLADRQ LTLLTSPYLW TGLFLGSAPA IAWYLAQWQH YGGSFLQINL
QSQTFNRVFQ PVEGHSGPPW YYVLEILKYG FPWLLFLPGG LYLAAKKRDT SWGCLILVGT
IVYLASISVM RTKLPWYVMP IYPFLALAIG AKLADVWQYH HVKSTTLVVF FVILAIAGLG
GCVYFATTET QPVLIAMSLV LAVSMATVAW LVNQGDRNFI PVLFTGMYLV LIMFVSSQSW
IWELNEAFPV KPVAALIRQH VLPGTKIYTS FAYNRPSLDF YCDCQVLTEP SISQQMAKRN
DYLLLDNTTL EKINLSGNEI LGTVENFTLI APSKN
|
|---|
| |