Gene Ava_1292 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1292 
Symbol 
ID3683035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1582613 
End bp1583035 
Gene Length423 bp 
Protein Length140 aa 
Translation table11 
GC content42% 
IMG OID637716630 
Productmannose-6-phosphate isomerase type II 
Protein accessionYP_321811 
Protein GI75907515 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0662] Mannose-6-phosphate isomerase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0017175 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTCAAA CTCAAGAAAC CACAACAAAA ACTCACACTT TACCCCTACC TACTACCATT 
ACTAGCCGTA GTGTTGCTGC AACAGAGTTG CGTCCTTGGG GTTCTTTTAC AGTACTGGAA
GAAGGGCGTG GATATAAAAT CAAACGGATT GAGGTGAAAC CTGGACATCG CCTCAGCTTA
CAAATGCACC ATCACCGTAG TGAACATTGG ATTGTTGTCT CCGGTACAGC CAGAGTAGTC
TGTGGTGAAA AGGAAATTCT ATTAAGTAAT AATCAGTCTA CCTACGTACC CCAATGTACT
GCTCACCGTC TAGAGAATCC TGGCGTAATT CCCTTAGTAC TCATTGAAGT ACAAAACGGC
GAATATTTAG GTGAAGATGA TATTATTCGC TACCAAGATG ATTACTCTCG AACATCGAAT
TAA
 
Protein sequence
MAQTQETTTK THTLPLPTTI TSRSVAATEL RPWGSFTVLE EGRGYKIKRI EVKPGHRLSL 
QMHHHRSEHW IVVSGTARVV CGEKEILLSN NQSTYVPQCT AHRLENPGVI PLVLIEVQNG
EYLGEDDIIR YQDDYSRTSN