| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1289 |
|---|
| Symbol | |
|---|
| ID | 3683129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 1580359 |
|---|
| End bp | 1580829 |
|---|
| Gene Length | 471 bp |
|---|
| Protein Length | 156 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 637716627 |
|---|
| Product | 30S ribosomal protein S7 |
|---|
| Protein accession | YP_321808 |
|---|
| Protein GI | 75907512 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0049] Ribosomal protein S7 |
|---|
| TIGRFAM ID | [TIGR01029] ribosomal protein S7, bacterial/organelle |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.00393219 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCGTC GTGGTGTTAT TCAAAGGCGG CCAGTCCCGC CTGACTCTGT ATATAACAGT
CGCCTGGTGA GTATGATCAT CCGGCGAATT ATGCGTCATG GAAAGAAATC ACTAGCTGCG
CGCATCGTTT ATGATGCTTT GAAAACAATT GAAGAACGCA CTGGTAACAA TGCCTTAGAA
GTTTTTGAAA GAGCAGTGCG GAACGCAACA CCTTTAGTAG AAGTAAAAGC CCGCCGTGTC
GGTGGTGCAA CCTACCAAGT ACCGATGGAA GTGCGTACAG AACGTGGTAC TACCCTAGCA
CTACGTTGGC TGGTACAATT TTCTAGAAGT AGACCCGGAC GGACAATGGC CAGCAGATTG
GCTAATGAGC TACTAGATGC TGCCAATGAA AGCGGGAATG CGATTCGCAA ACGGGAAGAA
ACACACCGGA TGGCGGAAGC AAACAAAGCA TTTGCACACT ATCGTTACTA A
|
|---|
| Protein sequence | MSRRGVIQRR PVPPDSVYNS RLVSMIIRRI MRHGKKSLAA RIVYDALKTI EERTGNNALE
VFERAVRNAT PLVEVKARRV GGATYQVPME VRTERGTTLA LRWLVQFSRS RPGRTMASRL
ANELLDAANE SGNAIRKREE THRMAEANKA FAHYRY
|
|---|
| |