| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1286 |
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| Symbol | rpsJ |
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| ID | 3683126 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 1576368 |
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| End bp | 1576685 |
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| Gene Length | 318 bp |
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| Protein Length | 105 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637716624 |
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| Product | 30S ribosomal protein S10 |
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| Protein accession | YP_321805 |
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| Protein GI | 75907509 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0051] Ribosomal protein S10 |
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| TIGRFAM ID | [TIGR01049] ribosomal protein S10, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00174582 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACTC TACAGCAGCA GAAGATTAGA ATCCGTTTAC AAGCTTTTGA CCGTCGTTTA
TTAGATACAT CTTGCGAGAA GATCGTTGAC ACAGCTAACC GTACTAACGC TACAGCCATA
GGCCCAATTC CCTTACCCAC AAAACGGAAG ATATACTGCG TGCTGCGATC GCCCCACGTA
GATAAGGATT CCCGCGAACA TTTTGAAACC CGTACTCACC GCCGGATTAT CGACATTTAC
CAGCCTTCAT CTAAAACCAT CGATGCGCTG ATGAAGCTGG ATTTACCATC TGGTGTAGAT
ATTGAAGTAA AGCTTTAA
|
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| Protein sequence | MATLQQQKIR IRLQAFDRRL LDTSCEKIVD TANRTNATAI GPIPLPTKRK IYCVLRSPHV
DKDSREHFET RTHRRIIDIY QPSSKTIDAL MKLDLPSGVD IEVKL
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