Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1284 |
Symbol | |
ID | 3683124 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 1574588 |
End bp | 1575475 |
Gene Length | 888 bp |
Protein Length | 295 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637716622 |
Product | prephenate dehydratase |
Protein accession | YP_321803 |
Protein GI | 75907507 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0077] Prephenate dehydratase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0000630901 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAAA ACATAATGAC ATTATCTGTT GCTCATTTAG GGCCACCTGG TACTTATGCA GAACAAGCTA CTATTTTTTA TGTAAAATGG CTGAGTCACA GTAGTGGACT AGAAGCTAGT TTACGTCCTT ATTCCAGCAT TGCTCAGTCG CTCCAAGCTC TAGCTCAAGG AGAAACTCAA TTAGCTGTTG TGCCTGTAGA AAATTCTATT GAAGGCAGTG TCACCATGAC AATGGATACA ATGTGGCAGC TAGATAGTTT GCAAATTCAG TCAGCTTTAA TCTTGCCCAT TGCTCATGCT TTAATTTCTT GTGCCGATAG TTTAGATGGG ATAAAAACGG TTTATTCTCA TCCCCAAGCT CTAGCCCAGT GTCAAGGTTG GCTAAGAGCG TTTCTTCCTA ATGTGCAACT GATTCCTAGT AATTCAACAA CTGAGGCGCT GGAAAAACTA GAGTATGATT TGTCAATAGG GGCGATCGCT TCCAGTAGAG CTGCTGAACT TTATAATTTA CCCATACTAG CAAGTCGTAT TAATGACTAT GCAGAAAACT GTACTCGCTT TTGGGTAATC AGTCAGGCAG AATCTGATAT TACCCATCAA TTGCCTTTAC AAAAACTCAC TCACACTTCT ATTGCTTTTA GCGTACCTGC CAACGTGCCT GGTGCATTGC TCAAAACACT GCAAGTTTTT GCCCACTTGG ATATTAACTT GAGTCGAATT GAGTCTCGTC CAACAAAGCG ATCGCTGGGC GAGTATTTAT TTTTTATTGA TTTAGAAGCT GATGTCAATA CACCACAGAT GAAATCTGCT TTGCTTGAAT TAACTACTTA CACAGAAGTC TTAAAAATTT TTGGTAGTTA CAGTGTACTT TCAGCTAACG ATCAATAG
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Protein sequence | MGKNIMTLSV AHLGPPGTYA EQATIFYVKW LSHSSGLEAS LRPYSSIAQS LQALAQGETQ LAVVPVENSI EGSVTMTMDT MWQLDSLQIQ SALILPIAHA LISCADSLDG IKTVYSHPQA LAQCQGWLRA FLPNVQLIPS NSTTEALEKL EYDLSIGAIA SSRAAELYNL PILASRINDY AENCTRFWVI SQAESDITHQ LPLQKLTHTS IAFSVPANVP GALLKTLQVF AHLDINLSRI ESRPTKRSLG EYLFFIDLEA DVNTPQMKSA LLELTTYTEV LKIFGSYSVL SANDQ
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