| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1282 |
|---|
| Symbol | rnhB |
|---|
| ID | 3683122 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 1572821 |
|---|
| End bp | 1573498 |
|---|
| Gene Length | 678 bp |
|---|
| Protein Length | 225 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637716620 |
|---|
| Product | ribonuclease HII |
|---|
| Protein accession | YP_321801 |
|---|
| Protein GI | 75907505 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0164] Ribonuclease HII |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.000227459 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGCTAA AGAAGGCGCA AACTACTGAT AATCTAAAGT TGCCAATATC CCTAAATGCA
ACTGGTTGGC TGGAGTCCTC CCCTGATTGG TCGAATATTT CAGGCCTGGT GGCAGGAGTA
GATGAAGTAG GTCGGGGCGC TCTCTTTGGG CCTGTAGTGG CAGCATCTGT TATACTACCA
GCTAGCTCTT TTCCTCAGCT GATGACAGCT GAGATTAAAG ATAGCAAGAA ACTATCTCAT
TCTCGCAGAG TTCAGCTAGC GCAGCAAATT TCTACGCTAG CTATAGACTG GAGAATTGGT
TATGCAACAA CGGCTGAAAT TGACCGAATT AATATTTTGC AGGCAACACT GTTAGCCATG
AGACGGTCTG TAAAAAAGCT GAAATTACAG CCCATACTCT GTTTGGTGGA TGGGAATCAA
CCAGTACAGG ACTTGCCAAT TTTACAACAA ACTATTGTTA AGGGAGATGA GCGATCGCTC
AATATTGCCG CGGCCAGCAT CATGGCTAAA GTTTGGCGTG ACGATTTGAT ACAGCGTCTA
TCAACCAAAT ATCCGATGTA TGATTTAAAG AGTAACAAGG GATATGGTAG CAAAAAGCAT
TTGTTAGCTC TGGAAAAACA CGGAGCTTCA CCCTTACATC GTCAGTCGTT CCGCCCTTGT
CAAATATCAC TTGACTAG
|
|---|
| Protein sequence | MMLKKAQTTD NLKLPISLNA TGWLESSPDW SNISGLVAGV DEVGRGALFG PVVAASVILP
ASSFPQLMTA EIKDSKKLSH SRRVQLAQQI STLAIDWRIG YATTAEIDRI NILQATLLAM
RRSVKKLKLQ PILCLVDGNQ PVQDLPILQQ TIVKGDERSL NIAAASIMAK VWRDDLIQRL
STKYPMYDLK SNKGYGSKKH LLALEKHGAS PLHRQSFRPC QISLD
|
|---|
| |