| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1281 |
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| Symbol | |
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| ID | 3683121 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1570487 |
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| End bp | 1572550 |
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| Gene Length | 2064 bp |
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| Protein Length | 687 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637716619 |
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| Product | ribonuclease E and G |
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| Protein accession | YP_321800 |
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| Protein GI | 75907504 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000695712 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAAAAC AAATTATTAT CGCGGAGCAG CATCAAATCG CTGCTGTATT TTCGGAAGAC
CAAATACAAG AACTCGTTGT AGCCACAGGC CATCATCAAA TCGGTGATAT CTACTTAGGT
GTAGTAGAAA ATGTATTACC AGGTATTGAT GCAGCTTTTG TCAACATCGG AGATCCAGAA
CGTAATGGTT TTATTCATGT AACGGATTTA GGCCCTTTAC GACTCAAGCG AACAGCAGCA
GCAATTACGG AATTATTAGC ACCACAACAA AAAGTTTTGG TGCAGGTAAT GAAAGAGCCA
ACGGGAACAA AAGGCCCAAG GCTCACAGGT AATATCACTT TACCCGGACG TTATGTGGTA
CTGATGCCCT ATGGTAGGGG TGTAAATTTA TCGAGGCGGA TTAAGAGTGA AAGTGAACGT
AACCGTTTAC GAGCATTAGC AATTTTAATT AAACCTGCTG GCATGGGTTT GCTGGTGCGT
ACAGAAGCAG AAGGCAAGCC AGAAGAAGCA ATCATCGAAG ATTTGGAAGT ACTGCAAAAG
CAATGGGAAG CCATTCAACA AGAGGCACAG TCAACTCGTG CGCCAGCACT CCTGAATCGG
GACGATGATT TTATCCAGCG CGTATTACGT GATATGTATG GTGCGGATGT AAATCGGATT
GTCGTCGATT CCAGTACTGG TTTGAAGCGA GTCAAACAGT ATTTGCAGAA CTGGAGTGGC
GGTCAGACAC CACAAGGATT GTTGATTGAC CATCACCGCG ATCGCTCCCC CATTTTAGAA
TATTTCCGGA TCAATGCCGC AATTAGAGAA GCGCTCAAAC CAAGAGTAGA CCTACCTTCT
GGCGGTTATA TCATTATTGA GCCAACAGAA GCATTAACTG TCATAGATGT CAACTCAGGT
TCCTTCACGC GATCGGCCAC AGCCAGAGAA ACTGTTTTGT GGACCAACTG TGAAGCCGCA
ACAGAAATTG CTCGTCAGCT ACGTCTGCGG AATATCGCTG GGGTAATCGT CGTTGATTTT
ATTGACATGG AATCACGCCG TGACCAGTTA CAAGTTCTCG AACACTTTAA TAAAGCCCTC
CGCGCAGATA AAGCTCGTCC CCAAATTGCC CAACTTACAG AGCTAGGTTT AGTAGAACTG
ACTCGCAAAC GGCAAGGGCA AAATATTTAT GAATTGTTTG GTGACACTTG CCCAGCCTGC
GGTGGTTTAG GACATACAGT CCGCTTACCC GGAGAAACGG AGAACCGCTT ACCTACTCCA
GCAGCAGAAA TTCCAGAACG TTTTGTATCT CTGCCTACAC GAGAGCCTCG TTTACCAACT
GCACGCATCA GCGAACCACG AGAAACCTAC GATGGATTTG GTGAAGCGTT TGAAAACGAC
TCTGACTTGG GTGCTTTAAA TTTAATTAAT CATCCTAGCT ATCAAGAACT GAACGATAAC
AATAAACGTC GCGCCCGTAC CCGTCGCAGT CGGATTGGCA TCAATGGTAC AAATGGCAAA
GATGAACAAA GAATTACTGC CAACCCACTA GCTTTTATCA ATGAGTCAGA TTTAGACCTT
GATGGAGATG TTGAATTAAG CGCTCCACCA GAGTTACCCA CACCCAACCT GGGAAAATCT
GGCTGGATTG AAAGAGCAGA ACGGACTAAG GTTATTAAAA CAGAGCCAGT TAAGCCAGTG
GTGGAACCAC CGGAGATTAA GACTGTAGAA ATGACTCCAG AAGAACAAGA TATTTTTGCT
CTTATGGGGA TTTCTCCGCT AATTAAATTA GAGCAGGAGG TGAAAAATCC TAAATCCGTC
ATTATTAACA TTGTTCAACC GGGACAAACA CCAACTATAC CGACTGAAAT AACTCCGGAG
CCGGTGGCTA AGACAACACC AAGCGTTGAA GTGAGTACAC CAAAAGTAAA GCTGGAATCT
AAGTCTGTGT CGGTAACGGC AACTGAACCA ATAAAGTTGA CAGAAACGAC GGAAGAATCT
GAAGTGAATG CCGCTAGCAC TGCTAACCGT CGCCGTCGTC GTCGTTCTTC CGCTTCCGAC
TCAGATACGG GAGAGGATAG TTAA
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| Protein sequence | MPKQIIIAEQ HQIAAVFSED QIQELVVATG HHQIGDIYLG VVENVLPGID AAFVNIGDPE
RNGFIHVTDL GPLRLKRTAA AITELLAPQQ KVLVQVMKEP TGTKGPRLTG NITLPGRYVV
LMPYGRGVNL SRRIKSESER NRLRALAILI KPAGMGLLVR TEAEGKPEEA IIEDLEVLQK
QWEAIQQEAQ STRAPALLNR DDDFIQRVLR DMYGADVNRI VVDSSTGLKR VKQYLQNWSG
GQTPQGLLID HHRDRSPILE YFRINAAIRE ALKPRVDLPS GGYIIIEPTE ALTVIDVNSG
SFTRSATARE TVLWTNCEAA TEIARQLRLR NIAGVIVVDF IDMESRRDQL QVLEHFNKAL
RADKARPQIA QLTELGLVEL TRKRQGQNIY ELFGDTCPAC GGLGHTVRLP GETENRLPTP
AAEIPERFVS LPTREPRLPT ARISEPRETY DGFGEAFEND SDLGALNLIN HPSYQELNDN
NKRRARTRRS RIGINGTNGK DEQRITANPL AFINESDLDL DGDVELSAPP ELPTPNLGKS
GWIERAERTK VIKTEPVKPV VEPPEIKTVE MTPEEQDIFA LMGISPLIKL EQEVKNPKSV
IINIVQPGQT PTIPTEITPE PVAKTTPSVE VSTPKVKLES KSVSVTATEP IKLTETTEES
EVNAASTANR RRRRRSSASD SDTGEDS
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