Gene Ava_1275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1275 
SymbolclpS 
ID3683115 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1563792 
End bp1564073 
Gene Length282 bp 
Protein Length93 aa 
Translation table11 
GC content49% 
IMG OID637716613 
ProductATP-dependent Clp protease adaptor protein ClpS 
Protein accessionYP_321794 
Protein GI75907498 
COG category[S] Function unknown 
COG ID[COG2127] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value0.822842 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCAGTCG AAACCATTGA GAAGCGTTCC ACATCCCGCA AGCTCGCGCC TCGGTATCGC 
GTTTTGCTCC ATAACGATGA CTACAACTCT ATGGAGTATG TGGTGCAAGT ACTAATCACC
ACCGTGCCGA GCCTAACCCA GCCTCAAGCT GTGAGTATTA TGATGGAAGC CCACACTAAT
GGGCTTGCCT TAGTTATTAC CTGCGCTCAA GAACACGCAG AATTTTACTG CGAAACCCTC
AAAGATCACG GTCTTAGCAG TACCATCGAA CCCGATGAAT AA
 
Protein sequence
MSVETIEKRS TSRKLAPRYR VLLHNDDYNS MEYVVQVLIT TVPSLTQPQA VSIMMEAHTN 
GLALVITCAQ EHAEFYCETL KDHGLSSTIE PDE