| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1271 |
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| Symbol | |
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| ID | 3683170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1560432 |
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| End bp | 1561265 |
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| Gene Length | 834 bp |
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| Protein Length | 277 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637716609 |
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| Product | formamidopyrimidine-DNA glycosylase |
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| Protein accession | YP_321790 |
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| Protein GI | 75907494 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0266] Formamidopyrimidine-DNA glycosylase |
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| TIGRFAM ID | [TIGR00577] formamidopyrimidine-DNA glycosylase (fpg) |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0651657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGAAT TGCCTGAAGT TGAAACAGTA CGGCGGGGTT TAAACCAACT AACCCTAAAC
CGAAAAATTA CGGGTGGAGA TGTGTTGCTT CATCGCACCA TCGCTCACCC TTTTTCTGTT
GGTGATTTTT TGAATGGAAT TACCGGTGAT TCCATTAGTG CTTGGCATCG TCGCGGTAAA
TATCTCCTCG CTTCCACTAC TTCCGCCGCT TGGCTAGGTG TGCATCTGAG GATGACTGGT
CAATTACTGT GGTTAAACCA AGATGAGCCT TTACATAAGC ACACGCGGGT AAGAATATTT
TTCGAGGATC AACAGGAATT ACGCTTTGTT GACCAACGAA CTTTCGGTCA AATGTGGTGG
GTTTCATCGG GAATGGCTGT AGAAAGCGTG ATTACTGGTT TAGCTAAACT TGCCGTAGAT
CCCTTTTCAC CTGAATTTAC TGTTGAGTAC CTTGCTAATA AGCTGCATAA TCGTCGCCGT
CCCATAAAAA CAGCACTATT AGACCAGTCG GTTGTTGCAG GATTAGGTAA CATCTATGCT
GACGAAGCAT TGTTTAAAAG TGGTGTGTTA CCAGAAACTC TATGTACAGA AGTGCAGTTA
AAGCAAATTG AGCTTTTGAG GACGGCAATT ATTCAAGTTT TGGAAACCAG TATTGAGGCT
GGTGGTACAA CTTTTAGTAA TTTTCTCAAC GTTAAAGGGG TCAACGGTAA TTATGGTGGT
GTCGCCTGGG TGTATAACCG TGCAGGGGAA CCATGTAAAG TTTGTGGTGA TGTAATTCAG
CGCATCAAGC TAGGTGGAAG ATCCAGCCAT TTTTGTCGCC AGTGTCAAGT TTAG
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| Protein sequence | MPELPEVETV RRGLNQLTLN RKITGGDVLL HRTIAHPFSV GDFLNGITGD SISAWHRRGK
YLLASTTSAA WLGVHLRMTG QLLWLNQDEP LHKHTRVRIF FEDQQELRFV DQRTFGQMWW
VSSGMAVESV ITGLAKLAVD PFSPEFTVEY LANKLHNRRR PIKTALLDQS VVAGLGNIYA
DEALFKSGVL PETLCTEVQL KQIELLRTAI IQVLETSIEA GGTTFSNFLN VKGVNGNYGG
VAWVYNRAGE PCKVCGDVIQ RIKLGGRSSH FCRQCQV
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