Gene Ava_1262 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1262 
Symbol 
ID3683161 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1552309 
End bp1553064 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content44% 
IMG OID637716600 
ProductABC transporter-like 
Protein accessionYP_321781 
Protein GI75907485 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAGCCC AATTACGGCT AGAACAAGTT AATCTGTTTG CCAAGCTAAA AACCCAACTC 
CAGGGCTACC CAATATTGCA GGATATCTCT TTTGAGATTA ACTCCGGCGA TCGCCTAGCA
ATTATTGGTC CCTCCGGTGC TGGTAAAACT TCTCTACTAC GTCTCATTAA CCGACTTAGT
GAACCCAATA GCGGCAAAAT TTTTCTAGAA AATCAAGAAT ATCAGCAAAT TCCTATTATC
CAGTTACGCC AGATAGTGAC CCTGGTATTA CAAGAGCCAA AGTTACTGGG GATGACAGTC
CAGCAAGCCT TAGCTTATCC TTTAGTTTTG CGCGGTTTGC CCAAAGAGAC CATTCAACAG
CGAGTCAGTC ATTGGGCAGA ACAGCTGCAA ATCCCTAGTG ATTGGTTAGG ACGCACTGAG
GTACAACTTT CGACTGGACA GAGACAGCTC GTAGCGATCG CTCGTGCTTT AGTCATTCAA
CCGAAAATCC TCCTCTTAGA CGAGCCAACC TCTCATCTAG ATATTGGCAT AGCCTCCGAT
GTCATCCCAG TCTTAACCCA GCTAACTCAA ACTCATCACA CAACAATTGT GATGGTAAAC
AGCCAGCTAG ACTTCACTCA GATGTTTTGT AATCGGCTTT TGTATTTACA GCAAGGACGT
TTATTGGTAG ATCAAACAGC TTCTAACATC GACTGGACTG ACTTACAAAA GAGGTTGATG
CACGCCGAAA ACCAAGCCGA TGAAGAATGG AACTAA
 
Protein sequence
MTAQLRLEQV NLFAKLKTQL QGYPILQDIS FEINSGDRLA IIGPSGAGKT SLLRLINRLS 
EPNSGKIFLE NQEYQQIPII QLRQIVTLVL QEPKLLGMTV QQALAYPLVL RGLPKETIQQ
RVSHWAEQLQ IPSDWLGRTE VQLSTGQRQL VAIARALVIQ PKILLLDEPT SHLDIGIASD
VIPVLTQLTQ THHTTIVMVN SQLDFTQMFC NRLLYLQQGR LLVDQTASNI DWTDLQKRLM
HAENQADEEW N