Gene Ava_1256 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1256 
Symbol 
ID3683155 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1546364 
End bp1547587 
Gene Length1224 bp 
Protein Length407 aa 
Translation table11 
GC content40% 
IMG OID637716594 
Producthypothetical protein 
Protein accessionYP_321775 
Protein GI75907479 
COG category[S] Function unknown 
COG ID[COG2339] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACTAATG ATTATTTGCA ATTTGCCAAA CAAGGCGATA TGAATGCGAT CGCCTCATTG 
ATGAGCTTAT ATTTTCAACC GCAAGGCATC ACTGTCAAAG CTAGTATCAA AAATAGTTGT
TTACAGTTGA TGTTGGAGTC TGAACAGGTT CCAGATAAAC CATCATCTGT AGCTTTTATT
CGTCAGGAAT TATCTACGTG GCAACCTGCA TTAATTACTA ATGTGCGAAT TTATGGTTTG
AGGACTGATC AATCTTTTCC AGATTGGGAA GAAACTTTTT CACTGATCAG ACAACAGTCT
GAAACTGCAA CATTTTTAGC AGCACTACGG ACATTTAAAT TTGCTTCTGT AGTTCCTTAC
CAAGATGTCT TTAGTGCCGA ACTATATAGT AATAATACGG TCAAACTCCT ATTATTTTTC
GGACTATTCC CTCTAGGCAT TGGTTTAATT GCTAACTCCA GTAATTTGGA ACAGACTGCT
TGGTTACTCG GTATTTATTA CGCCAGTATT TGGGGAGTAG TTTTATACAA TTTAATCAAG
CCTGCTTGGT TTTCTTGGCG GGAAACACTG AAATGTATTG TGTTTACTGC CATTGTGGGC
ATACCTTTAC TGCTGCTAAT TCAACAATTT CCCCTATTTC AGTTACTTTA CGCCGCTACA
GAGTCGAACT TAGGACTAAT CCCTCAATTG ATTGGGTTTA TTTTCGGTGT AGGAGTCTTA
GAGGAAATTT GCAAAGCCTT GCCAGTATAT CTATTCTTGC TGCGTCCTAG AAAACTCAAT
GAACCATTGA CAGGGGCATT TTATGGGGCT ATGTCAGGAT TAGGATTTGC GATCGCTGAA
GGTGGTTCCT ACTCTTTACT CTACGCCTTT AACTTAGTCA GAGGACAATC AGGCTTTGGT
ACTTATATCT TGGTAAACAC CATTCGCTTT GTCTCCTTAC CCCTGTTCCA TGCCATCTTA
GCTGGAATAG TCGGTTATTT TTTGGGACTA GCAGCAATTA ACCGTTCTCG ACAGCTACCA
ATTATGTTTA TTGGCGTAGC TTTGGCTGCT GTATTACACG GTTCATACAA CACATTTAGC
GATGGCATCC TTGGTCTTGT TATCATCAGC TTTACAATTT TATTGTTCGT CGCTTATTTG
CGTCGCAGCC AACAAATGGT AACAGAAATG CAGCAGGCAG AATTGGAGAG ATTGACATTA
CCGCAAGATA AATCTGAAAA CTAA
 
Protein sequence
MTNDYLQFAK QGDMNAIASL MSLYFQPQGI TVKASIKNSC LQLMLESEQV PDKPSSVAFI 
RQELSTWQPA LITNVRIYGL RTDQSFPDWE ETFSLIRQQS ETATFLAALR TFKFASVVPY
QDVFSAELYS NNTVKLLLFF GLFPLGIGLI ANSSNLEQTA WLLGIYYASI WGVVLYNLIK
PAWFSWRETL KCIVFTAIVG IPLLLLIQQF PLFQLLYAAT ESNLGLIPQL IGFIFGVGVL
EEICKALPVY LFLLRPRKLN EPLTGAFYGA MSGLGFAIAE GGSYSLLYAF NLVRGQSGFG
TYILVNTIRF VSLPLFHAIL AGIVGYFLGL AAINRSRQLP IMFIGVALAA VLHGSYNTFS
DGILGLVIIS FTILLFVAYL RRSQQMVTEM QQAELERLTL PQDKSEN