Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1248 |
Symbol | |
ID | 3683186 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1536515 |
End bp | 1538026 |
Gene Length | 1512 bp |
Protein Length | 503 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637716586 |
Product | AAA ATPase, central region |
Protein accession | YP_321767 |
Protein GI | 75907471 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0464] ATPases of the AAA+ class |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTCC GTGAAGAGTT TAAGCTGCTA CTGAGAGCGC GTTATCCGTT AATTTACATA CCTACCTATG AAGAAGAACG GGTAGAAACT GCTATCCGTG AAGAAGCAGC CAATCAAGGT AATCGCCCAG TATACACTTG GGATTTTGTC GATGGTTATC AAGGTAACCC CAATGATGTG GGATTTGGGC GGCGCAATCC CCTGCAAGCT TTAGAATTTT TAGAGAAATT ACCAGCATCA GCGCCAGCAG TCATTATTTT GCGAGATTAT CATCGATTTT TGGATGATGT GGCGATCGCT CGCAAACTCC GCAATCTGGC GAGACTGCTG AAGTCGCAAC CGAAAAATAT TGTCTTATTA TCGCCACGCA TCGCTATTCC TGACGATTTA ACTGAAATTT TAACGGTTGT CGAGTTCCCC TTACCTAACG CCCCAGAAAT TAAAGTAGAG ATTGAACGTT TACTGCAAGC TACTGGTAAT TCCCTCTCTG GGAAAGTTAC CGATGATTTA GTGCGTTCTT GCCAAGGGCT ATCGATGGAA AGAATTCGGC GGGTTTTGGC GAAAGCGATC GCTACTCATG GCGAATTGCA ACCAGAAGAC GTAGATTTAG TTTTGGAGGA AAAGCGCCAA ACTATCCGCC AAACCCAAAT CCTCGACTTT TACCCCGCCA CTGAGCAGAT TTCTGATATA GGGGGACTAG ATAACCTCAA AGATTGGTTA TTACGTCGTG GCGGTTCCTT TAGCGAGCGC GCCCGCCAAT ATGGATTACC CCACCCACGG GGTTTATTAT TAGTAGGCAT TCAAGGTACT GGTAAATCCT TAACGGCAAA AGCGATCGCT CATCATTGGC ACTTACCCCT ACTACGCCTA GATGTCGGAC GATTATTTGG CGGTTTGGTG GGTGAATCAG AATCCCGCAC CCGGCAAATG ATTCAGGTAG CAGAAGCCCT TGCACCCTGT GTTCTGTGGA TTGATGAAAT TGATAAAGCT TTTTCTGGAT TGGGTAGTAA AGGTGATGCG GGAACCACTA GCCGCGTCTT CGGCACATTT ATTACTTGGC TAGCTGAAAA AACCTCCCCA GTGTTCGTTG TTGCTACCGC CAACAACATC CAAGCTTTAC CACCAGAAAT GTTGCGGAAA GGGCGATTTG ACGAAATTTT CTTTGTTGGT TTACCCAGTC AAGAAGAAAG AAAAGCCATT TTTAATGTTC ATTTATCCCG ACTGCGCCCC CACAATTTGA AAAATTATGA CATTGAGCGT TTAGCATACG AAACACCAGA TTTTTCAGGG GCAGAAATCG AGCAAACTTT GATAGAAGCA ATGCACATCG GCTTTAGTCA AAATCGAGAT TTCACTACCG ACGATGTTTT GGAGGCGGCT AGTCAAATCA TACCCCTGGC TAGAACGGCT GTAGAGCAGA TTCAGGAACT ACAAGAATGG GCAGCAGCAG GGAGAGCGCG TCTAGCTTCA AAACAAAGCC CCTTGAGTGA CAGCTTTGGC AAGCTACGCT AA
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Protein sequence | MNFREEFKLL LRARYPLIYI PTYEEERVET AIREEAANQG NRPVYTWDFV DGYQGNPNDV GFGRRNPLQA LEFLEKLPAS APAVIILRDY HRFLDDVAIA RKLRNLARLL KSQPKNIVLL SPRIAIPDDL TEILTVVEFP LPNAPEIKVE IERLLQATGN SLSGKVTDDL VRSCQGLSME RIRRVLAKAI ATHGELQPED VDLVLEEKRQ TIRQTQILDF YPATEQISDI GGLDNLKDWL LRRGGSFSER ARQYGLPHPR GLLLVGIQGT GKSLTAKAIA HHWHLPLLRL DVGRLFGGLV GESESRTRQM IQVAEALAPC VLWIDEIDKA FSGLGSKGDA GTTSRVFGTF ITWLAEKTSP VFVVATANNI QALPPEMLRK GRFDEIFFVG LPSQEERKAI FNVHLSRLRP HNLKNYDIER LAYETPDFSG AEIEQTLIEA MHIGFSQNRD FTTDDVLEAA SQIIPLARTA VEQIQELQEW AAAGRARLAS KQSPLSDSFG KLR
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