Gene Ava_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1248 
Symbol 
ID3683186 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1536515 
End bp1538026 
Gene Length1512 bp 
Protein Length503 aa 
Translation table11 
GC content46% 
IMG OID637716586 
ProductAAA ATPase, central region 
Protein accessionYP_321767 
Protein GI75907471 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0464] ATPases of the AAA+ class 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCC GTGAAGAGTT TAAGCTGCTA CTGAGAGCGC GTTATCCGTT AATTTACATA 
CCTACCTATG AAGAAGAACG GGTAGAAACT GCTATCCGTG AAGAAGCAGC CAATCAAGGT
AATCGCCCAG TATACACTTG GGATTTTGTC GATGGTTATC AAGGTAACCC CAATGATGTG
GGATTTGGGC GGCGCAATCC CCTGCAAGCT TTAGAATTTT TAGAGAAATT ACCAGCATCA
GCGCCAGCAG TCATTATTTT GCGAGATTAT CATCGATTTT TGGATGATGT GGCGATCGCT
CGCAAACTCC GCAATCTGGC GAGACTGCTG AAGTCGCAAC CGAAAAATAT TGTCTTATTA
TCGCCACGCA TCGCTATTCC TGACGATTTA ACTGAAATTT TAACGGTTGT CGAGTTCCCC
TTACCTAACG CCCCAGAAAT TAAAGTAGAG ATTGAACGTT TACTGCAAGC TACTGGTAAT
TCCCTCTCTG GGAAAGTTAC CGATGATTTA GTGCGTTCTT GCCAAGGGCT ATCGATGGAA
AGAATTCGGC GGGTTTTGGC GAAAGCGATC GCTACTCATG GCGAATTGCA ACCAGAAGAC
GTAGATTTAG TTTTGGAGGA AAAGCGCCAA ACTATCCGCC AAACCCAAAT CCTCGACTTT
TACCCCGCCA CTGAGCAGAT TTCTGATATA GGGGGACTAG ATAACCTCAA AGATTGGTTA
TTACGTCGTG GCGGTTCCTT TAGCGAGCGC GCCCGCCAAT ATGGATTACC CCACCCACGG
GGTTTATTAT TAGTAGGCAT TCAAGGTACT GGTAAATCCT TAACGGCAAA AGCGATCGCT
CATCATTGGC ACTTACCCCT ACTACGCCTA GATGTCGGAC GATTATTTGG CGGTTTGGTG
GGTGAATCAG AATCCCGCAC CCGGCAAATG ATTCAGGTAG CAGAAGCCCT TGCACCCTGT
GTTCTGTGGA TTGATGAAAT TGATAAAGCT TTTTCTGGAT TGGGTAGTAA AGGTGATGCG
GGAACCACTA GCCGCGTCTT CGGCACATTT ATTACTTGGC TAGCTGAAAA AACCTCCCCA
GTGTTCGTTG TTGCTACCGC CAACAACATC CAAGCTTTAC CACCAGAAAT GTTGCGGAAA
GGGCGATTTG ACGAAATTTT CTTTGTTGGT TTACCCAGTC AAGAAGAAAG AAAAGCCATT
TTTAATGTTC ATTTATCCCG ACTGCGCCCC CACAATTTGA AAAATTATGA CATTGAGCGT
TTAGCATACG AAACACCAGA TTTTTCAGGG GCAGAAATCG AGCAAACTTT GATAGAAGCA
ATGCACATCG GCTTTAGTCA AAATCGAGAT TTCACTACCG ACGATGTTTT GGAGGCGGCT
AGTCAAATCA TACCCCTGGC TAGAACGGCT GTAGAGCAGA TTCAGGAACT ACAAGAATGG
GCAGCAGCAG GGAGAGCGCG TCTAGCTTCA AAACAAAGCC CCTTGAGTGA CAGCTTTGGC
AAGCTACGCT AA
 
Protein sequence
MNFREEFKLL LRARYPLIYI PTYEEERVET AIREEAANQG NRPVYTWDFV DGYQGNPNDV 
GFGRRNPLQA LEFLEKLPAS APAVIILRDY HRFLDDVAIA RKLRNLARLL KSQPKNIVLL
SPRIAIPDDL TEILTVVEFP LPNAPEIKVE IERLLQATGN SLSGKVTDDL VRSCQGLSME
RIRRVLAKAI ATHGELQPED VDLVLEEKRQ TIRQTQILDF YPATEQISDI GGLDNLKDWL
LRRGGSFSER ARQYGLPHPR GLLLVGIQGT GKSLTAKAIA HHWHLPLLRL DVGRLFGGLV
GESESRTRQM IQVAEALAPC VLWIDEIDKA FSGLGSKGDA GTTSRVFGTF ITWLAEKTSP
VFVVATANNI QALPPEMLRK GRFDEIFFVG LPSQEERKAI FNVHLSRLRP HNLKNYDIER
LAYETPDFSG AEIEQTLIEA MHIGFSQNRD FTTDDVLEAA SQIIPLARTA VEQIQELQEW
AAAGRARLAS KQSPLSDSFG KLR