| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1242 |
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| Symbol | |
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| ID | 3683180 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1529297 |
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| End bp | 1530352 |
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| Gene Length | 1056 bp |
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| Protein Length | 351 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637716580 |
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| Product | photosystem II reaction centre protein PsbD/D2 |
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| Protein accession | YP_321761 |
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| Protein GI | 75907465 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.30805 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCATCG CAGTAGGAAG GGCCCCCAGT AGAGGGTGGT TTGACGTACT AGACGACTGG
TTAAAGCGCG ATCGCTTCGT ATTCGTAGGT TGGTCAGGGA TATTATTATT TCCTTGCGCC
TTCCTAGCAC TAGGCGGTTG GCTAACCGGT ACAACATTTG TCACATCGTG GTACACCCAC
GGACTAGCAT CATCCTACCT GGAAGGAGCA AACTTCCTGA CAGTAGCAGT ATCAAGCCCA
GCAGACAGCA TGGGACACTC CCTGTTGTTG TTGTGGGGAC CAGAAGCCCA AGGGGACTTT
ACCCGTTGGT GTCAGCTAGG AGGGTTATGG CCATTCGTAG CCCTACACGG AGCCTTCGGT
TTGATCGGAT TCATGCTACG TCAATTTGAA ATTGCGCGCC TAGTAGGAAT CAGACCCTAC
AACGCACTAG CATTTTCAGC ACCCATAGCG GTATTCGTCA GCGTATTCCT GATGTACCCA
TTGGGACAAT CATCTTGGTT CTTTGCACCA AGCTTTGGAG TAGCAGCAAT CTTCAGATTC
TTGTTATTCC TCCAAGGGTT CCACAACTGG ACACTAAACC CCTTCCACAT GATGGGAGTA
GCAGGTGTAC TAGGTGGAGC GCTACTGTGT GCCATCCACG GTGCAACAGT AGAAAACACC
CTATTTGAAG ACGGCGAAGG CGCAAACACC TTCCGCGCCT TCAACCCCAC CCAATCAGAA
GAAACCTATT CAATGGTGAC AGCGAACCGA TTCTGGTCAC AGATATTCGG GATTGCTTTC
TCCAACAAAC GCTGGTTGCA CTTCTTCATG TTGTTCGTAC CCGTCACTGG GTTGTGGATG
AGTGCGGTAG GCATCGTTGG TTTAGCATTG AACCTGCGGG CTTATGACTT CGTTTCCCAA
GAATTACGGG CAGCAGAAGA CCCAGAATTT GAAACCTTCT ATACCAAGAA CATTTTGCTG
AACGAGGGTA TCCGCGCTTG GATGGCTCCT CAAGATCAGC CTCACGAAAA ATTTGTATTC
CCCGAAGAGG TACTACCACG TGGTAACGCT CTCTAA
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| Protein sequence | MTIAVGRAPS RGWFDVLDDW LKRDRFVFVG WSGILLFPCA FLALGGWLTG TTFVTSWYTH
GLASSYLEGA NFLTVAVSSP ADSMGHSLLL LWGPEAQGDF TRWCQLGGLW PFVALHGAFG
LIGFMLRQFE IARLVGIRPY NALAFSAPIA VFVSVFLMYP LGQSSWFFAP SFGVAAIFRF
LLFLQGFHNW TLNPFHMMGV AGVLGGALLC AIHGATVENT LFEDGEGANT FRAFNPTQSE
ETYSMVTANR FWSQIFGIAF SNKRWLHFFM LFVPVTGLWM SAVGIVGLAL NLRAYDFVSQ
ELRAAEDPEF ETFYTKNILL NEGIRAWMAP QDQPHEKFVF PEEVLPRGNA L
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