| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1241 |
|---|
| Symbol | |
|---|
| ID | 3683179 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 1528204 |
|---|
| End bp | 1528800 |
|---|
| Gene Length | 597 bp |
|---|
| Protein Length | 198 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637716579 |
|---|
| Product | photosystem I assembly protein Ycf4 |
|---|
| Protein accession | YP_321760 |
|---|
| Protein GI | 75907464 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.62684 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCAT CAACAACAAT TAACAAAGGT GATTCACCTA ACGGTGACAG TTCCGCTTCC
AGCGTCCTCC ATCAAAAAGT TCTCGGTTCT CGTCGGTTCA GTAACTACTG GTGGGCAAGT
ATTGTGACGT TGGGAGCATC GGGCTTTCTT TTGGCAGGCA TATCCAGTTA CTTAAAAGTT
AATTTACTCA TAGTTACCGA CCCAACTCAA CTGATATTTG TACCTCAAGG TTTGGTAATG
GGTCTATATG GTACTGCTGG CTTGCTTTTA GCGTCGTACT TGTGGCTAGC TATCCTCTGG
GACTTAGGCG GCGGCTACAA CGATTTCAAT CGAGAAACTG GGAATATTAA AATATTTCGT
TGGGGATTTC CTGGTAAAAA CCGTAAGATT GAAATTGGCA GCCGTATACA AGATATACAG
TCTGTACGTA TAGACATCAA GGAAGGCTTG AACCCCCGCC GCGCACTATA TCTCCGTGTT
AAAGGTCGTC GAGATATACC GTTGACTAGA GTTGGTCAAC CTTTATCTTT GGCAGAATTA
GAAACTCAAG GCGCTCAGTT AGCCCGCTTT TTAGGAGTAC CTTTAGAAGG TCTTTAA
|
|---|
| Protein sequence | MTASTTINKG DSPNGDSSAS SVLHQKVLGS RRFSNYWWAS IVTLGASGFL LAGISSYLKV
NLLIVTDPTQ LIFVPQGLVM GLYGTAGLLL ASYLWLAILW DLGGGYNDFN RETGNIKIFR
WGFPGKNRKI EIGSRIQDIQ SVRIDIKEGL NPRRALYLRV KGRRDIPLTR VGQPLSLAEL
ETQGAQLARF LGVPLEGL
|
|---|
| |