| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1233 |
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| Symbol | |
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| ID | 3683171 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1519263 |
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| End bp | 1520441 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 637716571 |
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| Product | DevC protein |
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| Protein accession | YP_321752 |
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| Protein GI | 75907456 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR01185] DevC protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.000657909 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGGAT TCATTCAAGA ACTACAGCGA CGTACACCTT TGGGATGGCT ACAACTGAGT
CATTATAAAA GCCGCCTCTT GGTTGCTTTA TCTGGTATCG CCTTTGCCGA TGTCCTGATG
TTCATGCAGT TGGGCTTTCA AAATGCCTTG TATGACAGTA ACACCCGCCT CAATCGGGCA
GTGCTTGCAG ACATCGTTTT AATCAGTCCT CAAAGCCGAA ATATGCAGAA CTTGGCTACC
TTCTCGCGGC GGCGGCTGTT GCAAGCTGCG GATGTTCCCG GTGTGAAGTC CGCAGAAGCC
ATGTATATCG GTTTAGTCAC CTGGAAAAAT CCCCAAACTC GCCGTAAAAC TTCAGTACAA
GCAATTGGGT TTAATCCTGA GCAACCTGCT TTGAATATCC CAGAAGTTAA CAATCAGCTA
GATAAGATTA AGTTACCAGA TAACTTCATT TTCGACCGCG CAGCTAGGGG TGAATACAAC
AAAGTTTTTA GTCAAATTAG TGCGGGGGAA AGTGTCACTA CAGAAGTAGA TAAACGTACC
ATCTCGATTA GTGGGACATT TAAACTAGGT GCTTCCTTTG GTGCTGACGG TACTTTAATT
TCTAGTGATG AAAACTTCCT GCGTTTGTTT CCTCGCAGGC TAGCAGGAAG TATCAATCTA
GGCTTAGTTA ATGTTCAACC CGGTTATGAT CCAAAACAAG TAGCCGAAGC ACTGAAGTCT
TACCTTCCAA ATGATGATGT CAAAGTATTG ACTCGTGCTG AATACGTCAA AATGGAGGAA
GACTACTGGA AAACAAGTAG CCCCATCGGC TTCATTTTCA GTTTAGGCGT ATCAATGGGA
TTTATGGTCG GTGTGATTAT TGTTTATCAA GTACTTTCCA CTGACGTAAA TGCCCACCTC
AAAGAATATG CCACATTCAA AGCAATGGGA TACGGCAATT CTTATTTATT AGGAGTAATT
TTTGAAGAAG CTTTAATTCT AGCAGTCTTG GGTTTTATTC CAGGGTTTAT AGTTCCCTTA
GGGCTTTATC GATTAGCCGC AAATGCCACA AATTTACCCA TATTTATGAC AGCAGTTAGA
GCCTTCTTAG TCTTATTATT AACCCTAATC ATGTGTATCT TTTCTGGAGC TATAGCCACA
CGTAAATTAC AATCTGCTGA CCCAGCCGAT ATGTTTTGA
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| Protein sequence | MTGFIQELQR RTPLGWLQLS HYKSRLLVAL SGIAFADVLM FMQLGFQNAL YDSNTRLNRA
VLADIVLISP QSRNMQNLAT FSRRRLLQAA DVPGVKSAEA MYIGLVTWKN PQTRRKTSVQ
AIGFNPEQPA LNIPEVNNQL DKIKLPDNFI FDRAARGEYN KVFSQISAGE SVTTEVDKRT
ISISGTFKLG ASFGADGTLI SSDENFLRLF PRRLAGSINL GLVNVQPGYD PKQVAEALKS
YLPNDDVKVL TRAEYVKMEE DYWKTSSPIG FIFSLGVSMG FMVGVIIVYQ VLSTDVNAHL
KEYATFKAMG YGNSYLLGVI FEEALILAVL GFIPGFIVPL GLYRLAANAT NLPIFMTAVR
AFLVLLLTLI MCIFSGAIAT RKLQSADPAD MF
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