Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_1213 |
Symbol | |
ID | 3683253 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 1496060 |
End bp | 1496590 |
Gene Length | 531 bp |
Protein Length | 176 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637716551 |
Product | MgtC/SapB transporter |
Protein accession | YP_321732 |
Protein GI | 75907436 |
COG category | [S] Function unknown |
COG ID | [COG1285] Uncharacterized membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.463741 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATTTGA CCGCTAGTGA TTGGCCACAC ATAGCATTCA GGCTGACAAT GGCACTTTTA GTTGGTTGTT TGATTGGATT TAACCGTCAA AAAGGGGGTA GACCAGCCGG AATGAGAACA TTTATGTTAG TGAGTATGGG GGCGGCGCTT TTTGTGATGA TTCCTCTACA AGCCGAGGGC GACAGCCCTT ATGCAGCGAC TAATGCTTTG AGTCGCACAA TTCAAGGTGT CACAACTGGA GTTGGGTTTC TAGGAGCGGG ATTGATTCTC CAAGATTCAC CCGGTAAAAC TACAGTTCCT AAAGTACGTA ATTTAACAAC AGCAGCTTGT GTATGGACTG CGGCAGGTTT GGGAGCAGCA ATTGGTTGCG GCTTGTGGCA AATGGGATTA ATTGGAGGGC TGTTAACTTT GATCACTCTG AGTGGAGTTA AACGCATCAA TCGCACAGTC AAGCTGAATA AAAGTGAAGC AAGACAGGTG AATTATGGAA CGATGATTAA TGACTCTGAT GATTCTGATG ATGATGACTA A
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Protein sequence | MYLTASDWPH IAFRLTMALL VGCLIGFNRQ KGGRPAGMRT FMLVSMGAAL FVMIPLQAEG DSPYAATNAL SRTIQGVTTG VGFLGAGLIL QDSPGKTTVP KVRNLTTAAC VWTAAGLGAA IGCGLWQMGL IGGLLTLITL SGVKRINRTV KLNKSEARQV NYGTMINDSD DSDDDD
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