Gene Ava_1213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_1213 
Symbol 
ID3683253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp1496060 
End bp1496590 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content45% 
IMG OID637716551 
ProductMgtC/SapB transporter 
Protein accessionYP_321732 
Protein GI75907436 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.463741 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTATTTGA CCGCTAGTGA TTGGCCACAC ATAGCATTCA GGCTGACAAT GGCACTTTTA 
GTTGGTTGTT TGATTGGATT TAACCGTCAA AAAGGGGGTA GACCAGCCGG AATGAGAACA
TTTATGTTAG TGAGTATGGG GGCGGCGCTT TTTGTGATGA TTCCTCTACA AGCCGAGGGC
GACAGCCCTT ATGCAGCGAC TAATGCTTTG AGTCGCACAA TTCAAGGTGT CACAACTGGA
GTTGGGTTTC TAGGAGCGGG ATTGATTCTC CAAGATTCAC CCGGTAAAAC TACAGTTCCT
AAAGTACGTA ATTTAACAAC AGCAGCTTGT GTATGGACTG CGGCAGGTTT GGGAGCAGCA
ATTGGTTGCG GCTTGTGGCA AATGGGATTA ATTGGAGGGC TGTTAACTTT GATCACTCTG
AGTGGAGTTA AACGCATCAA TCGCACAGTC AAGCTGAATA AAAGTGAAGC AAGACAGGTG
AATTATGGAA CGATGATTAA TGACTCTGAT GATTCTGATG ATGATGACTA A
 
Protein sequence
MYLTASDWPH IAFRLTMALL VGCLIGFNRQ KGGRPAGMRT FMLVSMGAAL FVMIPLQAEG 
DSPYAATNAL SRTIQGVTTG VGFLGAGLIL QDSPGKTTVP KVRNLTTAAC VWTAAGLGAA
IGCGLWQMGL IGGLLTLITL SGVKRINRTV KLNKSEARQV NYGTMINDSD DSDDDD