| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1192 |
|---|
| Symbol | |
|---|
| ID | 3683330 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 1467250 |
|---|
| End bp | 1467849 |
|---|
| Gene Length | 600 bp |
|---|
| Protein Length | 199 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 637716529 |
|---|
| Product | potassium-transporting ATPase subunit C |
|---|
| Protein accession | YP_321711 |
|---|
| Protein GI | 75907415 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG2156] K+-transporting ATPase, c chain |
|---|
| TIGRFAM ID | [TIGR00681] K+-transporting ATPase, C subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.419988 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTTTTA TTCGAGAAAT TTTGAGAGCA ATTCGTATTA CTCTAATCTT TTGGTTGGTG
ACAGCCATTA TTTATCCTCT AGCTATTTTG GTAGTTGGTC AGGGTTTATT TCCCAGCCAA
GCTAACGGTA GCATTATGGA AAATATCGAA GGAACACCAA TAGGTTCCAG CTTAATTAGT
CAAGTATTCA CTTCCGAAAA ATATTTTCAC AGTCGTCCTA GCGCAGTTAG ATATAGTCAA
GGCAGAAAAG CCAAGCCAAC AGGTATATCT GGTGGTAGCA ATCTAGCTCC TAGTAACCCT
GCATTACTTG AGCGCATCAT AGAGGAAGCA AATCAACTCC GCGATGATAA TATTCAACCT
ATTGCCGATT TAATCTATAG TTCTGGTTCA GGCTTAGATC CCCATATTTC TGTTCAAGCT
GCAAGACAAC AGTTAGAGAG AGTTGCTCGC GCCCGTGGTG TTCAACCAGA TGAAATTATG
CTAGCAATTA ATAAGTTCAC TGATGGTAGA TTTTTAGGAA TTTTTGGTGA ACCAGGAGTT
AATGTTCTGC GATTAAATTA TGCTCTCGAT TTGCAAGATA TTAATCGTCA ACAAAACTGA
|
|---|
| Protein sequence | MSFIREILRA IRITLIFWLV TAIIYPLAIL VVGQGLFPSQ ANGSIMENIE GTPIGSSLIS
QVFTSEKYFH SRPSAVRYSQ GRKAKPTGIS GGSNLAPSNP ALLERIIEEA NQLRDDNIQP
IADLIYSSGS GLDPHISVQA ARQQLERVAR ARGVQPDEIM LAINKFTDGR FLGIFGEPGV
NVLRLNYALD LQDINRQQN
|
|---|
| |