| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_1188 |
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| Symbol | |
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| ID | 3683326 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 1460750 |
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| End bp | 1463761 |
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| Gene Length | 3012 bp |
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| Protein Length | 1003 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637716525 |
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| Product | cyclic nucleotide-regulated ABC bacteriocin/lantibiotic exporters |
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| Protein accession | YP_321707 |
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| Protein GI | 75907411 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
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| TIGRFAM ID | [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.229753 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTATA TTAAGAGCGC TTTTCAAGAA TTTCTTGTCA CCATTGAGGG TTTTGACCAG
TTACCAAGTG AGGAACTGAC TCAAATCCTC GATAATCTAC AGCCATTTCG CTATCGCATT
GGTCAAAAAA TTATTGGCAA AGAAAGAACA CCCGAACGAG TAACAATTAT TTATGAAGGT
CAAGTGCGGC TGTTGGGATT TGATCCGCAA ACGCAAGTTC CGACAACCCT CAAGTTGATG
AAACCAGGGG AAATCATTGG CGAAATTGGG TTATTGCGGG ATGTGGCTTG TGAAACTGCG
ATCGCCTCTG CCGATGAAGT GATAGGCTTA ACCTTAAATG CCACAGACTA CCTACGTTTG
TTGGAGTCAT ACCCAGGTTT TGCTCACGCA CGCCAAAACC AAAGTTACAT CATTGAGGTT
TTCGATGTTC TGAGTTCCCA GTTAGCTAAC CAAGCTAACG TGATTAGTAA CCTTGATGAA
CTGGCTGCAC AAGCTCTAGA AAATGCCAAA ATAGATTACC TTCCACCAGG GAGAAATTTC
TTCCATCAAT TAGATAGTGA AAGCATTTGG TTTGTTAGTG GCGGAACAGT CACAAATTAC
CCCATAGGTT CTCGCCTAGA ACCTAGTGAT GGAAATCGGG TAATTGAAGT CCAGGGAGAA
AGTCCGGCGC GGTTAGTTGG TTTAGAGCCT TTAGATTTAT TGTTTTTAGA GAACGATTAT
CACCAAGGTG GAGAACTTAC CGTCTATGAT AGTTCACCCA AAATTACAGA AGCTTTAGAT
ATTCCCTATG CTAGCGAAGA AGAACTTTCG CAATCAAGTT CTGTTCCCAG CAATGCTAAA
CCAAGACAAA AATTCCCCTT TGTTCGGGGT AAAGGTGAAC TAAATTCTAC CTTTGCCTGT
TTTCAAATGC TCACCAAGCA CCTACAAATT CCCTTCCGCA AAGAAGTAGT GCGGCGCATT
TTAAATGAGC AAATGAAGCG TCAAGGAACC ATCTCCTTCC CCGCTTGCGC TTACCTCTCC
GAGTTAATTG GACTCAAAGC CAATCTAGTT GATTTACCGG CGGCGGCTAT TACCCGTGTT
CCTACCCCGG CCTTAGTCCG TTATGGTGAT GGTTATGCGG TTTTGTATGC GGCGGATGCC
AATAATGTAG TTTTAGGTGT ACCGTCCCAA GGGATAGTAC GCTGCAAACC CGCACAGATA
CTTGAGCATT TAAATATTGT CGAAGACAGT TATCCCCCAC AAATTAGGGT ATTGCTGCTG
TCTGCTACCA AAGAAACGCC ACAAGAACGC TTTGGTTTAC GTTGGTTCAT ACCTTACTTA
TCCCGCTACC GCCGAGTTCT GATTGAAGTT TTTATCGCTT CTTTCTTTGT GCAGTTAGCG
GCCTTAGCCA ATCCTTTGGT TATTCAGCTC ATCATTGATA AAGTCATCGT CCAAAACAGT
ATTAGCACCC TGAATGTTTT GGGAGTTTTG CTGTTAGCCG TTGGGGTATT TGAAGCAGTT
CTCACCACCT TAAGGACTTA CTTATTTGTC GATACTACCA ACCGTATCGA TATGGGTTTG
GGTTCAGAAA TTATTGACCA CCTATTACGG CTACCACTGC GCTACTTTGA AAAGCGTCCA
GTGGGTGAAC TGGCTACCCG CATCAACGAA TTAGAAAATA TTCGGCAGTT TCTCACTGGG
ACAGCGTTGA CAGTAGGTTT AGATGCGGTC TTTTCCGTAG TTTATATCAT TGTCATGCTG
TTTTATAGCT GGCAACTTAC CTTAGTTGGT TTAGGAACGA TTCCCATATT TATCGTTATC
ACCTTAATTG CATCGCCTAC GGTGAGTAGA CAGTTACGTT CCAAAGCCGA ACGCAACTCA
GAAACCCAAT CCTATTTAGT TGAGGTGATG TCTGGGATTC AAACAGTGAA GGCGCAAAAT
ATCGAATTGC GATCGCGCTT TTCCTGGCAA GAACGGTATG CTCGATATGT AGCAGCAGGG
TTTAAAAATG TCATCACATC AACCCTCGCT AACTCTACCA GTCAATTTCT CAACAAACTC
AGCAGTTTAC TTGTGTTGTG GGTAGGTTCT TATTTGGTAC TCCAAGGTGA ATTAACTTTA
GGGGAATTAA TCGCCTTTAG AATTATCTCT GGTTACGTCA CCAGTCCTAT CTTACGCTTA
GCTCAACTCT GGCAAAGCTT CCAAGAAACA GCATTATCCC TAGAACGGTT GAGCGATATC
GTTGATACGC CCCAAGAAGC CGAAATTGAC CGCTACAATA TTCCCTTACC GGAAATTCAA
GGCTCTGTTA AATACGAGAA TATTTCCTTT AGGTTTGCAC CAAGCGGCCC TCTACAGCTA
TCCAACGTCA ATTTAGAAAT CCCCTCTGGG AAATTTATCG GTATTGTCGG ACAAAGCGGC
TCTGGTAAAA GTACGATGAT GAAATTACTG CTGCGCTTGT ACGACGTAGA GTCCGGCCGA
ATTTTAATTG ATGGTTACGA TATTGCCAAA GTAGAACTAT ATTCATTACG TCGCCAAGTC
GGTGTAGTAC CCCAAGAAAC CCTGTTATTT GACGGGACAG TGCAAGAAAA TATTGCTCTG
ACAAATCCTG ATGCTAGCAC TGACGAAATT ATCGAAGCGG CGCGAGTAGC AGCAGCCCAT
GAGTTTATTA TGAGCTTACC CAACGGGTAT AATACCCGCG TCGGCGAGCG TGGGGCTGGA
CTTTCTGGGG GACAAAGACA GAGAATAGCG ATCGCCCGTT CTGTCCTCCA AAGACCTAAA
CTATTAGTAT TAGACGAAGC TACCAGCGCT CTAGACTATC CTACAGAACG ACAAGTTTGC
CTCAACTTAG CTAAAGCCTT TCAAGGTAGC ACAGTATTCT TCATCACCCA CCGCCTCAAC
ACCGTCAGTC ATGCAGACAT GATTGTGGTC ATGGACGCAG GGAAAGTTAT AGAACAAGGA
AGCCACCAAG AATTAATGGC GGCTAAAGGT CATTATTTTT ACCTGTACCA ACAACAGGAA
GTAAATTTGT AA
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| Protein sequence | MTYIKSAFQE FLVTIEGFDQ LPSEELTQIL DNLQPFRYRI GQKIIGKERT PERVTIIYEG
QVRLLGFDPQ TQVPTTLKLM KPGEIIGEIG LLRDVACETA IASADEVIGL TLNATDYLRL
LESYPGFAHA RQNQSYIIEV FDVLSSQLAN QANVISNLDE LAAQALENAK IDYLPPGRNF
FHQLDSESIW FVSGGTVTNY PIGSRLEPSD GNRVIEVQGE SPARLVGLEP LDLLFLENDY
HQGGELTVYD SSPKITEALD IPYASEEELS QSSSVPSNAK PRQKFPFVRG KGELNSTFAC
FQMLTKHLQI PFRKEVVRRI LNEQMKRQGT ISFPACAYLS ELIGLKANLV DLPAAAITRV
PTPALVRYGD GYAVLYAADA NNVVLGVPSQ GIVRCKPAQI LEHLNIVEDS YPPQIRVLLL
SATKETPQER FGLRWFIPYL SRYRRVLIEV FIASFFVQLA ALANPLVIQL IIDKVIVQNS
ISTLNVLGVL LLAVGVFEAV LTTLRTYLFV DTTNRIDMGL GSEIIDHLLR LPLRYFEKRP
VGELATRINE LENIRQFLTG TALTVGLDAV FSVVYIIVML FYSWQLTLVG LGTIPIFIVI
TLIASPTVSR QLRSKAERNS ETQSYLVEVM SGIQTVKAQN IELRSRFSWQ ERYARYVAAG
FKNVITSTLA NSTSQFLNKL SSLLVLWVGS YLVLQGELTL GELIAFRIIS GYVTSPILRL
AQLWQSFQET ALSLERLSDI VDTPQEAEID RYNIPLPEIQ GSVKYENISF RFAPSGPLQL
SNVNLEIPSG KFIGIVGQSG SGKSTMMKLL LRLYDVESGR ILIDGYDIAK VELYSLRRQV
GVVPQETLLF DGTVQENIAL TNPDASTDEI IEAARVAAAH EFIMSLPNGY NTRVGERGAG
LSGGQRQRIA IARSVLQRPK LLVLDEATSA LDYPTERQVC LNLAKAFQGS TVFFITHRLN
TVSHADMIVV MDAGKVIEQG SHQELMAAKG HYFYLYQQQE VNL
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